Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0130.Seq
         (962 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12509-1|CAA73111.1|  393|Homo sapiens UDP-Gal:GlcNAc galactosyl...    31   4.7  
BC009985-1|AAH09985.1|  393|Homo sapiens B4GALT3 protein protein.      31   4.7  
BC006099-1|AAH06099.1|  393|Homo sapiens UDP-Gal:betaGlcNAc beta...    31   4.7  
BC000276-1|AAH00276.1|  393|Homo sapiens UDP-Gal:betaGlcNAc beta...    31   4.7  
AL590714-5|CAH72145.1|  393|Homo sapiens UDP-Gal:betaGlcNAc beta...    31   4.7  
AK023311-1|BAB14520.1|  145|Homo sapiens protein ( Homo sapiens ...    31   4.7  
AF038661-1|AAC39734.1|  393|Homo sapiens beta-1,4-galactosyltran...    31   4.7  
AF020921-1|AAQ13412.1|  395|Homo sapiens beta 1,4-galactosyltran...    31   4.7  
AB024435-1|BAA75820.1|  393|Homo sapiens beta-1,4-galactosyltran...    31   4.7  

>Y12509-1|CAA73111.1|  393|Homo sapiens UDP-Gal:GlcNAc
           galactosyltransferase protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>BC009985-1|AAH09985.1|  393|Homo sapiens B4GALT3 protein protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>BC006099-1|AAH06099.1|  393|Homo sapiens UDP-Gal:betaGlcNAc beta
           1,4- galactosyltransferase, polypeptide 3 protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>BC000276-1|AAH00276.1|  393|Homo sapiens UDP-Gal:betaGlcNAc beta
           1,4- galactosyltransferase, polypeptide 3 protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>AL590714-5|CAH72145.1|  393|Homo sapiens UDP-Gal:betaGlcNAc beta
           1,4-galactosyltransferase, polypeptide 3 protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>AK023311-1|BAB14520.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13249 fis, clone OVARC1000722, highly similar to
           Homo sapiens chromosome 1q21-1q23
           beta-1,4-galactosyltransferase mRNA. ).
          Length = 145

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>AF038661-1|AAC39734.1|  393|Homo sapiens
           beta-1,4-galactosyltransferase protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGRPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>AF020921-1|AAQ13412.1|  395|Homo sapiens beta
           1,4-galactosyltransferase homolog protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


>AB024435-1|BAA75820.1|  393|Homo sapiens
           beta-1,4-galactosyltransferase III protein.
          Length = 393

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -3

Query: 909 IFGXNLGKLTNXGXPAKISPKRAHLTGXVXGALXXAGCXGLPQRDPLXLPGPYAXXFRFL 730
           +FG + G   +   P  +    +HL G   G     G    P+R PL L GP +  F  +
Sbjct: 37  LFGRDQGPTFDYSHPRDVYSNLSHLPGAPGGPPAPQGLPYCPERSPL-LVGPVSVSFSPV 95

Query: 729 PFLS 718
           P L+
Sbjct: 96  PSLA 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,393,433
Number of Sequences: 237096
Number of extensions: 2796859
Number of successful extensions: 4593
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4584
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12769697060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)