Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0129.Seq
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118795-1|AAM50655.1|   85|Drosophila melanogaster GH16758p pro...    60   2e-09
AE014134-2805|AAF53585.1|   85|Drosophila melanogaster CG6115-PA...    60   2e-09
BT024338-1|ABC86400.1|  292|Drosophila melanogaster IP09923p pro...    29   3.8  
AY665374-1|AAT76541.1|  172|Drosophila melanogaster CG16707 prot...    29   3.8  
AE014296-1377|AAF50483.1|  447|Drosophila melanogaster CG7962-PA...    29   3.8  
AE013599-3871|AAF47204.1|  280|Drosophila melanogaster CG15874-P...    29   3.8  
AE014296-3028|ABC66132.1|  424|Drosophila melanogaster CG4174-PC...    29   5.1  

>AY118795-1|AAM50655.1|   85|Drosophila melanogaster GH16758p
           protein.
          Length = 85

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = +2

Query: 71  RKAVLNLYKTLLYLGRDWP--QGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKE 244
           R  V++LYK L YLGR++P   G   FRK++H  F  + +E DP+KI  ++  G ++ KE
Sbjct: 5   RSKVISLYKHLQYLGREYPGLNGPQKFRKQIHDAFMNHKDEQDPKKIVALLAQGRYLAKE 64

Query: 245 IEA 253
           +EA
Sbjct: 65  VEA 67


>AE014134-2805|AAF53585.1|   85|Drosophila melanogaster CG6115-PA
           protein.
          Length = 85

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = +2

Query: 71  RKAVLNLYKTLLYLGRDWP--QGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKE 244
           R  V++LYK L YLGR++P   G   FRK++H  F  + +E DP+KI  ++  G ++ KE
Sbjct: 5   RSKVISLYKHLQYLGREYPGLNGPQKFRKQIHDAFMNHKDEQDPKKIVALLAQGRYLAKE 64

Query: 245 IEA 253
           +EA
Sbjct: 65  VEA 67


>BT024338-1|ABC86400.1|  292|Drosophila melanogaster IP09923p
           protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +2

Query: 122 WPQGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEAHIS 262
           W   +DL + +L KV   N EE+   +  I+V+HGE+      +H++
Sbjct: 67  WRHHWDLDKPQLQKV--ANGEESSALRHIILVRHGEYTRTPNGSHLT 111


>AY665374-1|AAT76541.1|  172|Drosophila melanogaster CG16707
           protein.
          Length = 172

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -1

Query: 318 IMCLVIVIISSLHCSVLLQLICASISLTTNSPC----FTIICIFCG 193
           I+CL + + S+  C  +  ++C  + L + + C    F I+C+F G
Sbjct: 3   ILCLFVGLFSANLCEEVFLILCLFVGLFSANLCEEVTFLILCLFVG 48



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = -1

Query: 318 IMCLVIVIISSLHCSVLLQLICASISLTTNSPC----FTIICIFCG 193
           I+CL + + S+  C  +  ++C  + L + + C    F I+C+F G
Sbjct: 96  ILCLFVGLFSANLCEEVFLILCLFVGLFSANLCEEVTFLILCLFVG 141


>AE014296-1377|AAF50483.1|  447|Drosophila melanogaster CG7962-PA
           protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
 Frame = -3

Query: 322 SDYVFSYRHNIVS--SLLCTSSTYMCFNFFNNKLTMFYHYLY-FLWISFFTILAKYFMKP 152
           S+Y F Y  N+V    ++     Y+ F    ++   F  Y+  F+W    +++ KY++K 
Sbjct: 150 SNYFF-YGENLVDYFGVVINRVEYLKFLVTYHRFLSFALYIIGFVWF-VLSLVKKYYIKQ 207

Query: 151 FSKQVETLRPISTQIEERFIKIQNRFSMWLGHDVYFALLKC 29
           FS    T   +   + + ++ IQN F   +   V  +++ C
Sbjct: 208 FSLFAWTHVSLLIVVTQSYLIIQNIFEGLIWFIVPVSMIVC 248


>AE013599-3871|AAF47204.1|  280|Drosophila melanogaster CG15874-PA
           protein.
          Length = 280

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +2

Query: 122 WPQGFDLFRKRLHKVFSKNSEETDPQKIQIMVKHGEFVVKEIEAHIS 262
           W   +DL + +L KV   N EE+   +  I+V+HGE+      +H++
Sbjct: 55  WRHHWDLDKPQLQKV--ANGEESSALRHIILVRHGEYTRTPNGSHLT 99


>AE014296-3028|ABC66132.1|  424|Drosophila melanogaster CG4174-PC,
           isoform C protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 92  YKTLLYLGRDWPQGFDLFRKRL 157
           YK L +L  DWPQ F L +K L
Sbjct: 40  YKVLRHLHNDWPQYFRLLKKDL 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,562,696
Number of Sequences: 53049
Number of extensions: 305327
Number of successful extensions: 777
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)