Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0127.Seq
(933 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 64 4e-09
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 64 4e-09
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 64 4e-09
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 64 6e-09
UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 46 0.002
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 42 0.030
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.052
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.12
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 36 1.1
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 36 1.9
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 34 4.5
UniRef50_Q0IGC0 Cluster: Putative uncharacterized protein; n=1; ... 34 5.9
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 64.5 bits (150), Expect = 4e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 NRLAAHPPFASWRNSEEARTDRPSQQLR 338
NRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 86 NRLAAHPPFASWRNSEEARTDRPSQQLR 113
Score = 42.7 bits (96), Expect = 0.013
Identities = 27/55 (49%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 202 LAVVLQRRDWENPGVTQLIAL-QHIPLSP--AGVIAKRPAPIALPNSCAXEWRMA 357
LAVVLQRRDWENPGVTQL L H P + A+ P EWR A
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 64.5 bits (150), Expect = 4e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 NRLAAHPPFASWRNSEEARTDRPSQQLR 338
NRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 40 NRLAAHPPFASWRNSEEARTDRPSQQLR 67
Score = 42.3 bits (95), Expect = 0.017
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = +1
Query: 202 LAVVLQRRDWENPGVTQLIALQHIP 276
LAVVLQRRDWENPGVTQL L P
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHP 46
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 64.5 bits (150), Expect = 4e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 NRLAAHPPFASWRNSEEARTDRPSQQLR 338
NRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 44 NRLAAHPPFASWRNSEEARTDRPSQQLR 71
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/55 (50%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 202 LAVVLQRRDWENPGVTQLIAL-QHIPLSP--AGVIAKRPAPIALPNSCAXEWRMA 357
LAVVLQRRDWENPGVTQL L H P + A+ P S EWR A
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 64.5 bits (150), Expect = 4e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 NRLAAHPPFASWRNSEEARTDRPSQQLR 338
NRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 26 NRLAAHPPFASWRNSEEARTDRPSQQLR 53
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/55 (50%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 202 LAVVLQRRDWENPGVTQLIAL-QHIPLSP--AGVIAKRPAPIALPNSCAXEWRMA 357
LAVVLQRRDWENPGVTQL L H P + A+ P S EWR A
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 63.7 bits (148), Expect = 6e-09
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = -2
Query: 683 GFPRQALNRGLPLGFRFSALRHLDPKKL 600
GFPRQALNRGLPLGFRFSALRHLDPKKL
Sbjct: 45 GFPRQALNRGLPLGFRFSALRHLDPKKL 72
Score = 33.9 bits (74), Expect = 5.9
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -1
Query: 816 LDAPCYGALTXXXXXXXXRDPLTXASALAPRSFRFLP 706
+DAPC GAL+ T ASALAP F F P
Sbjct: 1 MDAPCSGALSAAGVVVTRSVTATLASALAPAPFAFFP 37
>UniRef50_Q8GEF9 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 99
Score = 47.2 bits (107), Expect = 6e-04
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2
Query: 827 GEXAXNPHLXIFLNTFQYVSVHGXLTLXIASIFLK 931
G+ A NP+L IFLNTF+YVS H +TL ASI LK
Sbjct: 28 GKCARNPYLFIFLNTFKYVSAHETITLINASIILK 62
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 45.6 bits (103), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 200 HWPSFYNVVTGKTLALPN 253
HWPSFYNVVTGKTLALPN
Sbjct: 5 HWPSFYNVVTGKTLALPN 22
Score = 35.9 bits (79), Expect = 1.5
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Frame = +1
Query: 253 LIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 357
LIALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 23 LIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 41.5 bits (93), Expect = 0.030
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 255 NRLAAHPPFASWRNSEEARTDRPSQQ 332
+RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 33 HRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.052
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 288 WRNSEEARTDRPSQQLR 338
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.12
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -2
Query: 359 FAIRHSXAQLLGRAIGAGLFAITPAGERG 273
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 36.3 bits (80), Expect = 1.1
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +3
Query: 255 NRLAAHPPFASWRNSEEARTDRPSQQLR 338
NRL AHP FASWR+ AR + PS + R
Sbjct: 32 NRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 35.5 bits (78), Expect = 1.9
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 205 AVVLQRRDWENPGVTQLIALQHIPLSPAGVIAKRPAPIALPNSCAXEW 348
A L+RR+ +NPG QL L+ +PL P G K+ AP PN + W
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKK-AP---PNRLSKNW 100
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 34.3 bits (75), Expect = 4.5
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 149 RXGARYPIRPIVSRIT 196
R GARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_Q0IGC0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 548
Score = 33.9 bits (74), Expect = 5.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 189 VLQFTGRRFTTS*LGKPWRYPTNRLAAHPPFA 284
V+ FT ++T + L +PW P N LAAH FA
Sbjct: 4 VIIFTAGKYTPNRLVRPWSQPWNHLAAHVRFA 35
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,402,251
Number of Sequences: 1657284
Number of extensions: 17380260
Number of successful extensions: 34901
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34896
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 85324527343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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