Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0126.Seq
(334 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-11
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 9e-09
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 9e-09
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 9e-09
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 9e-09
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 3e-08
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 8e-06
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 2e-04
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 29 1.2
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 2.9
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_54593| Best HMM Match : 7tm_1 (HMM E-Value=7.7e-06) 27 5.0
SB_42296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_16505| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_26241| Best HMM Match : B1 (HMM E-Value=2.5) 26 8.8
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 62.5 bits (145), Expect = 8e-11
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 138 SWIVARXTSAKAFAKGVFINQERKLEVRRRLDTALVLTV 254
SWI R T+AKAFAK VFINQERKLE RRR DT LVLT+
Sbjct: 4 SWIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTI 42
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 55.6 bits (128), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 153 RXTSAKAFAKGVFINQERKLEVRRRLDTALVLTV 254
R T+AKAFAK VFINQERKLE RRR DT LVLT+
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTI 42
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 55.6 bits (128), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 153 RXTSAKAFAKGVFINQERKLEVRRRLDTALVLTV 254
R T+AKAFAK VFINQERKLE RRR DT LVLT+
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTI 42
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 55.6 bits (128), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 153 RXTSAKAFAKGVFINQERKLEVRRRLDTALVLTV 254
R T+AKAFAK VFINQERKLE RRR DT LVLT+
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTI 42
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 55.6 bits (128), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 153 RXTSAKAFAKGVFINQERKLEVRRRLDTALVLTV 254
R T+AKAFAK VFINQERKLE RRR DT LVLT+
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTI 44
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 54.0 bits (124), Expect = 3e-08
Identities = 26/32 (81%), Positives = 28/32 (87%)
Frame = +3
Query: 159 TSAKAFAKGVFINQERKLEVRRRLDTALVLTV 254
T+AKAFAK VFINQERKLE RRR DT LVLT+
Sbjct: 30 TTAKAFAKNVFINQERKLEDRRRSDTVLVLTI 61
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 46.0 bits (104), Expect = 8e-06
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3
Query: 159 TSAKAFAKGVFINQERKLEVRRRLDT 236
T+AKAFAK VFINQERKLE RRR DT
Sbjct: 3 TTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +3
Query: 168 KAFAKGVFINQERKLEVRRRLDTALVLTV 254
++ AK VFINQERKLE RRR DT LVLT+
Sbjct: 14 ESIAKNVFINQERKLEDRRRSDTVLVLTI 42
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.1 bits (92), Expect = 2e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 168 KAFAKGVFINQERKLEVRRRLDTALVLTV 254
++ + VFINQERKLE RRR DT LVLT+
Sbjct: 14 ESICQDVFINQERKLEDRRRSDTVLVLTI 42
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +2
Query: 131 VKFLDRRKRXISESICQRCFHQSRTKV 211
VKFLD RK ESICQ F K+
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKL 28
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 189 FINQERKLEVRRRLDTALVLTV 254
FINQERKLE RRR DT LVLT+
Sbjct: 21 FINQERKLEDRRRSDTVLVLTI 42
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 189 FINQERKLEVRRRLDTALVLTV 254
FINQERKLE RRR DT LVLT+
Sbjct: 21 FINQERKLEDRRRSDTVLVLTI 42
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2
Query: 131 VKFLDRRKRXISESICQRCFHQSRTKV 211
VKFLD RK ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3
Query: 189 FINQERKLEVRRRLDTALVLTV 254
FINQERKLE RRR DT LVLT+
Sbjct: 21 FINQERKLEDRRRSDTVLVLTI 42
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2
Query: 131 VKFLDRRKRXISESICQRCFHQSRTKV 211
VKFLD RK ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 327 QNLWFPGSCPPSHCSNVGGSLDDILRLELGRY 232
+N W PGS S+C++ GG + L + +Y
Sbjct: 180 ENSWSPGSSQSSNCTSPGGHSPTLNSLHMDQY 211
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 149 DDPRISPLTSQYEC 108
DDPR+SP + QY C
Sbjct: 241 DDPRVSPTSQQYAC 254
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 312 PGSCPPSHCSNVGGSLDD 259
PGSC P +C N+ GSL D
Sbjct: 865 PGSCKPCNC-NMAGSLSD 881
>SB_54593| Best HMM Match : 7tm_1 (HMM E-Value=7.7e-06)
Length = 244
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 195 NQERKLEVRRRLDTALVLTVIC 260
N+ K +VRRR+D ++LT +C
Sbjct: 118 NEVEKEDVRRRVDQDILLTTLC 139
>SB_42296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 254 NMSSSDPPTLLQWLGGQLPGNQRFWTP 334
N S PPT+ L G G +++W+P
Sbjct: 198 NSSDIIPPTVTSLLKGSSMGTRKYWSP 224
>SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 100 NWGHSYCDVRGEILGSSQE 156
N+GHSY +RG I G +Q+
Sbjct: 635 NFGHSYVQIRGYIGGEAQK 653
>SB_19517| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1696
Score = 26.6 bits (56), Expect = 5.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 318 WFPGSCPPSHCS 283
W+PG CPP C+
Sbjct: 80 WYPGYCPPHKCA 91
>SB_16505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 213 EVRRRLDTALVLTVICHLAIRRR 281
EVRR +T LT +C L+IRRR
Sbjct: 494 EVRRICNTPRRLTHLCRLSIRRR 516
>SB_26241| Best HMM Match : B1 (HMM E-Value=2.5)
Length = 155
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 138 SWIVARXTSAKAFAKGVFINQERKLEVRRRLDTALVLTVICHLAIRRRY 284
S+ ++R T A G+ L+ RR + T H+A+ RRY
Sbjct: 22 SYAMSRRTHASLVWWGLMETLRTALDTTRRCGSGRTTTSAKHIAVSRRY 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,550,989
Number of Sequences: 59808
Number of extensions: 158254
Number of successful extensions: 422
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 475580678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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