Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0126.Seq
         (334 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    25   0.75 
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    25   0.75 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   9.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   9.3  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 237 ALVLTVICHLAIRRRYYNGSAGSF 308
           A ++TV+CHLAI+    +G+A SF
Sbjct: 7   ATIITVLCHLAIQ----DGAAKSF 26


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 237 ALVLTVICHLAIRRRYYNGSAGSF 308
           A ++TV+CHLAI+    +G+A SF
Sbjct: 7   ATIITVLCHLAIQ----DGAAKSF 26


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 8   LLEYFVHGIIEYD 46
           L+ +F HG + YD
Sbjct: 852 LIHFFTHGFLTYD 864


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 8   LLEYFVHGIIEYD 46
           L+ +F HG + YD
Sbjct: 853 LIHFFTHGFLTYD 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,415
Number of Sequences: 2352
Number of extensions: 4891
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)