Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0126.Seq
         (334 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein pr...    31   0.85 
AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open readi...    31   0.85 
AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens ...    31   0.85 
AB032254-1|BAA89211.1| 1878|Homo sapiens bromodomain adjacent to...    30   2.0  
AB002312-1|BAA20773.2| 1899|Homo sapiens KIAA0314 protein protein.     30   2.0  
AK093185-1|BAC04087.1|  663|Homo sapiens protein ( Homo sapiens ...    29   2.6  

>AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein
           protein.
          Length = 1097

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 245 SNRNMSSSDPPTLLQWLGGQLPGNQRFWTP 334
           S +NM++S  P  L W GG  PG Q   +P
Sbjct: 809 SGKNMTASQGPCALLWKGGDSPGQQEPGSP 838


>AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open reading
            frame 79 protein.
          Length = 1445

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 245  SNRNMSSSDPPTLLQWLGGQLPGNQRFWTP 334
            S +NM++S  P  L W GG  PG Q   +P
Sbjct: 1157 SGKNMTASQGPCALLWKGGDSPGQQEPGSP 1186


>AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens cDNA
            FLJ43857 fis, clone TESTI4007239. ).
          Length = 1445

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 245  SNRNMSSSDPPTLLQWLGGQLPGNQRFWTP 334
            S +NM++S  P  L W GG  PG Q   +P
Sbjct: 1157 SGKNMTASQGPCALLWKGGDSPGQQEPGSP 1186


>AB032254-1|BAA89211.1| 1878|Homo sapiens bromodomain adjacent to
           zinc finger domain 2A protein.
          Length = 1878

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 239 PSSNRNMSSSDPPTLLQWLGGQLPGN 316
           PS+N   +  DPP L Q+ GGQ P N
Sbjct: 102 PSANPGSNLKDPPLLSQFSGGQYPLN 127


>AB002312-1|BAA20773.2| 1899|Homo sapiens KIAA0314 protein protein.
          Length = 1899

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 239 PSSNRNMSSSDPPTLLQWLGGQLPGN 316
           PS+N   +  DPP L Q+ GGQ P N
Sbjct: 93  PSANPGSNLKDPPLLSQFSGGQYPLN 118


>AK093185-1|BAC04087.1|  663|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35866 fis, clone TESTI2007906. ).
          Length = 663

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 245 SNRNMSSSDPPTLLQWLGGQLPGNQRFWTP 334
           S +NM++S  P    W GG  PG Q   +P
Sbjct: 375 SGKNMTASQGPCAFLWKGGDSPGQQEPGSP 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,224,072
Number of Sequences: 237096
Number of extensions: 733715
Number of successful extensions: 1896
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)