Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0116.Seq
         (960 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29580-1|AAA61313.1|  686|Homo sapiens ZNF7 protein.                   31   6.2  
BC058923-1|AAH58923.1|  686|Homo sapiens ZNF7 protein protein.         31   6.2  
AB209619-1|BAD92856.1|  676|Homo sapiens zinc finger protein 7 (...    31   6.2  

>M29580-1|AAA61313.1|  686|Homo sapiens ZNF7 protein.
          Length = 686

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +2

Query: 284 EINVRRILSTRI--RKVSDAVKRESLNDCRNDGTTDCSECAKI 406
           EIN ++I   +   +K+SD ++ +  N+C  +   +C+EC K+
Sbjct: 216 EINTQKISRCQECQKKLSDCLQGKHTNNCHGEKPYECAECGKV 258


>BC058923-1|AAH58923.1|  686|Homo sapiens ZNF7 protein protein.
          Length = 686

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +2

Query: 284 EINVRRILSTRI--RKVSDAVKRESLNDCRNDGTTDCSECAKI 406
           EIN ++I   +   +K+SD ++ +  N+C  +   +C+EC K+
Sbjct: 216 EINTQKISRCQECQKKLSDCLQGKHTNNCHGEKPYECAECGKV 258


>AB209619-1|BAD92856.1|  676|Homo sapiens zinc finger protein 7 (KOX
           4, clone HF.16) variant protein.
          Length = 676

 Score = 31.1 bits (67), Expect = 6.2
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +2

Query: 284 EINVRRILSTRI--RKVSDAVKRESLNDCRNDGTTDCSECAKI 406
           EIN ++I   +   +K+SD ++ +  N+C  +   +C+EC K+
Sbjct: 206 EINTQKISRCQECQKKLSDCLQGKHTNNCHGEKPYECAECGKV 248


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,092,536
Number of Sequences: 237096
Number of extensions: 2202555
Number of successful extensions: 6581
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6581
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)