Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0116.Seq
         (960 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058457-1|AAL13686.1|  637|Drosophila melanogaster GH25737p pro...    30   5.4  
AE014298-533|AAF45876.2|  637|Drosophila melanogaster CG10803-PA...    30   5.4  

>AY058457-1|AAL13686.1|  637|Drosophila melanogaster GH25737p
           protein.
          Length = 637

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 22  LINFLISLMSYKTLMTKLSYLIFVNTK*KSYSVEQIKSNSSTKNCDVPDLFLIL 183
           L +FLI  MSY+ L+ K   L  +N++ + ++ EQ+      K  +VP + L+L
Sbjct: 342 LAHFLIPHMSYEQLLQKWPRLSRLNSRVRPFA-EQLLDKKKLKASNVPPVRLLL 394


>AE014298-533|AAF45876.2|  637|Drosophila melanogaster CG10803-PA
           protein.
          Length = 637

 Score = 29.9 bits (64), Expect = 5.4
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +1

Query: 22  LINFLISLMSYKTLMTKLSYLIFVNTK*KSYSVEQIKSNSSTKNCDVPDLFLIL 183
           L +FLI  MSY+ L+ K   L  +N++ + ++ EQ+      K  +VP + L+L
Sbjct: 342 LAHFLIPHMSYEQLLQKWPRLSRLNSRVRPFA-EQLLDKKKLKASNVPPVRLLL 394


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,708,762
Number of Sequences: 53049
Number of extensions: 714998
Number of successful extensions: 1529
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4792133502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)