Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0111.Seq
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   1.5  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.9  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
 Frame = -1

Query: 559 NLFL-IKLVFNNYYYYCFTQC--AGYYL----MSIRLINLI 458
           NL L IK     YYYY FTQC     YL    +++RL+ L+
Sbjct: 10  NLALPIKPARTVYYYYLFTQCNPLSTYLYRTILALRLVTLL 50


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 307 GFANGLASFRTCQIMGERIGSSESFSFGNSKNSNRKC 417
           GF  G ++ +  Q++ +    S + SFG + N +++C
Sbjct: 535 GFRRGRSTVQAIQLVVD--AGSHAMSFGRTNNRDKRC 569


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 303 CEAYPEPSCGCPVET*ASNLFVHST 229
           C++Y    CGCP    A N++   T
Sbjct: 335 CDSYSSSQCGCPDIPPAPNMWPSMT 359


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 342 TCSKRCQAICKTFCEAYPEPSCG 274
           TC   C   CK FC    E +CG
Sbjct: 518 TCGD-CHQECKDFCYGPNEDNCG 539


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,130
Number of Sequences: 2352
Number of extensions: 16231
Number of successful extensions: 68
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)