Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0111.Seq
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102649-1|AAM27478.1|  176|Drosophila melanogaster GH01072p pro...    78   2e-14
AE014296-3052|AAF49235.1|  176|Drosophila melanogaster CG6884-PA...    78   2e-14
BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p pro...    30   3.1  

>AY102649-1|AAM27478.1|  176|Drosophila melanogaster GH01072p
           protein.
          Length = 176

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +2

Query: 251 LAQVSTGQPHEGSGYASQKVLQMAWHRLEHVRSWVNELDRLKASH 385
           L QVSTGQPHEGSGYAS KVLQMAWHR++H RS V EL+  KA H
Sbjct: 66  LTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110



 Score = 75.4 bits (177), Expect = 8e-14
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = +3

Query: 63  PMERIQVLDEIEKDIITXXXXXXXXXXELSKEKSGQKQAESNTSQFLRTLSQVESKLSEQ 242
           P+++I  LDEIEK+II           EL KEKS QK AE+ + QFL++LS VESKLSEQ
Sbjct: 3   PLDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQ 62

Query: 243 INYL 254
           INYL
Sbjct: 63  INYL 66


>AE014296-3052|AAF49235.1|  176|Drosophila melanogaster CG6884-PA
           protein.
          Length = 176

 Score = 77.8 bits (183), Expect = 2e-14
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +2

Query: 251 LAQVSTGQPHEGSGYASQKVLQMAWHRLEHVRSWVNELDRLKASH 385
           L QVSTGQPHEGSGYAS KVLQMAWHR++H RS V EL+  KA H
Sbjct: 66  LTQVSTGQPHEGSGYASAKVLQMAWHRIQHARSRVRELEETKAKH 110



 Score = 75.4 bits (177), Expect = 8e-14
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = +3

Query: 63  PMERIQVLDEIEKDIITXXXXXXXXXXELSKEKSGQKQAESNTSQFLRTLSQVESKLSEQ 242
           P+++I  LDEIEK+II           EL KEKS QK AE+ + QFL++LS VESKLSEQ
Sbjct: 3   PLDKIHALDEIEKEIILCMQSAGQALQELGKEKSSQKNAETQSQQFLKSLSSVESKLSEQ 62

Query: 243 INYL 254
           INYL
Sbjct: 63  INYL 66


>BT009944-1|AAQ22413.1| 1374|Drosophila melanogaster SD04152p
           protein.
          Length = 1374

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 35/117 (29%), Positives = 45/117 (38%)
 Frame = +2

Query: 65  DGKDSSSRRNRKGYYHLSTMCSSSTS*IE*RKIWSKTS*IKHITVFKNTQSSGIKVE*TN 244
           DGKDSS+      + + S   +SS S     K  SK S  K      +  SS   +  T+
Sbjct: 461 DGKDSSTNSANNNFTNSSASSTSSNSSSTREKSSSKLSKNKDSNQVPSATSS---LSTTS 517

Query: 245 KLLAQVSTGQPHEGSGYASQKVLQMAWHRLEHVRSWVNELDRLKASHLATPRTATGS 415
            +  Q S+     GSG     V   A   L    S  NE     A  L+T  T  GS
Sbjct: 518 SINTQPSSSTATAGSGGTGTHVSSSAASGLNSAPSTTNEHSN-HAHTLSTNGTGAGS 573


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,340,762
Number of Sequences: 53049
Number of extensions: 645098
Number of successful extensions: 1673
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1673
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)