Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0108.Seq
         (782 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein ...    30   8.2  
AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein.     30   8.2  
AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein.     30   8.2  
AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein.     30   8.2  
AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein.     30   8.2  
AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein.     30   8.2  
AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens ...    30   8.2  
AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein.     30   8.2  

>AY442317-1|AAR14297.1| 1379|Homo sapiens attractin-like protein
            protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322  LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
            LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 870  LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 918


>AL512304-1|CAH74015.2| 1379|Homo sapiens attractin-like 1 protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322  LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
            LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 870  LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 918


>AL392087-1|CAI40794.2| 1379|Homo sapiens attractin-like 1 protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322  LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
            LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 870  LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 918


>AL357059-1|CAH70625.2| 1379|Homo sapiens attractin-like 1 protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322  LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
            LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 870  LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 918


>AL356100-1|CAI40417.2| 1379|Homo sapiens attractin-like 1 protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322  LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
            LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 870  LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 918


>AL355530-1|CAI13483.2| 1379|Homo sapiens attractin-like 1 protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322  LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
            LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 870  LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 918


>AK127277-1|BAC86914.1| 1233|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45344 fis, clone BRHIP3010289, moderately
           similar to Attractin precursor. ).
          Length = 1233

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322 LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
           LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 724 LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 772


>AB011106-1|BAA25460.2| 1028|Homo sapiens KIAA0534 protein protein.
          Length = 1028

 Score = 30.3 bits (65), Expect = 8.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 322 LVQSKPFVYIRSEAKRTSTVRVLRDSASNITRFGNSTIFQTSTKSCINS 176
           LV  KP V     A+       LR S SN T  G   ++ +STK C++S
Sbjct: 519 LVCEKPVVSPNQNARPCKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDS 567


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,392,616
Number of Sequences: 237096
Number of extensions: 1388144
Number of successful extensions: 1655
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)