BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0099.Seq (699 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine... 33 0.15 AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholin... 33 0.15 AL590343-2|CAC35866.1| 158|Caenorhabditis elegans Hypothetical ... 30 1.8 AL032622-7|CAA21502.1| 158|Caenorhabditis elegans Y66A7A.2 prot... 30 1.8 AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 30 1.8 Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 29 3.2 Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 29 3.2 Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical p... 29 3.2 Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 29 3.2 Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 29 3.2 AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal gro... 29 3.2 AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 29 3.2 AL132852-3|CAN86966.1| 249|Caenorhabditis elegans Hypothetical ... 28 5.6 Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical pr... 28 7.4 Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical pr... 28 7.4 Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical p... 27 9.8 Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 27 9.8 Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 27 9.8 AC006762-10|AAF60556.1| 301|Caenorhabditis elegans Hypothetical... 27 9.8 >AY519853-1|AAR89634.1| 545|Caenorhabditis elegans acetylcholine receptor (62.5 kD)(acr-23) protein. Length = 545 Score = 33.5 bits (73), Expect = 0.15 Identities = 21/57 (36%), Positives = 27/57 (47%) Frame = +2 Query: 95 PPGAVESTQIDDIEYGDPPEVEGPNFAELLTPVDQAIPSASTSKKQLPIPIKNVGAS 265 P GAV+ QI D + D +E P AE T A P ++ + L IP N AS Sbjct: 419 PDGAVKFNQISDFKNNDIGNMESPRMAESQTSETFAAPMDTSFTESLHIPELNRVAS 475 >AF067943-10|AAC17666.3| 545|Caenorhabditis elegans Acetylcholine receptor protein 23 protein. Length = 545 Score = 33.5 bits (73), Expect = 0.15 Identities = 21/57 (36%), Positives = 27/57 (47%) Frame = +2 Query: 95 PPGAVESTQIDDIEYGDPPEVEGPNFAELLTPVDQAIPSASTSKKQLPIPIKNVGAS 265 P GAV+ QI D + D +E P AE T A P ++ + L IP N AS Sbjct: 419 PDGAVKFNQISDFKNNDIGNMESPRMAESQTSETFAAPMDTSFTESLHIPELNRVAS 475 >AL590343-2|CAC35866.1| 158|Caenorhabditis elegans Hypothetical protein Y66A7A.2 protein. Length = 158 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +3 Query: 465 GKKLRSTEKRLVKRRQDHXHSS 530 G+ +RS EKRL+K R+D H + Sbjct: 97 GRSMRSCEKRLIKSRRDELHDA 118 >AL032622-7|CAA21502.1| 158|Caenorhabditis elegans Y66A7A.2 protein. Length = 158 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +3 Query: 465 GKKLRSTEKRLVKRRQDHXHSS 530 G+ +RS EKRL+K R+D H + Sbjct: 97 GRSMRSCEKRLIKSRRDELHDA 118 >AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical protein F54A3.6 protein. Length = 470 Score = 29.9 bits (64), Expect = 1.8 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 29 KLHRSRQEERDKDKSPPKEIKPPP 100 + H +E+R D++PP+E PPP Sbjct: 132 RYHSGPREDRFSDRNPPREHSPPP 155 >Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical protein Y57G11C.24e protein. Length = 665 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = +2 Query: 2 IRHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAEL 181 +RHE K+ R E+D + PPP AV + Q Y P + P Sbjct: 267 LRHEEKQIEDEKRRMHAEKDLITKETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNN 326 Query: 182 LTPVDQAIPSASTSKKQ 232 + V + S ++ ++Q Sbjct: 327 YSHVKVTVDSDTSPRQQ 343 >Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical protein Y57G11C.24d protein. Length = 845 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = +2 Query: 2 IRHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAEL 181 +RHE K+ R E+D + PPP AV + Q Y P + P Sbjct: 447 LRHEEKQIEDEKRRMHAEKDLITKETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNN 506 Query: 182 LTPVDQAIPSASTSKKQ 232 + V + S ++ ++Q Sbjct: 507 YSHVKVTVDSDTSPRQQ 523 >Z99281-37|CAJ44244.1| 740|Caenorhabditis elegans Hypothetical protein Y57G11C.24h protein. Length = 740 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = +2 Query: 2 IRHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAEL 181 +RHE K+ R E+D + PPP AV + Q Y P + P Sbjct: 544 LRHEEKQIEDEKRRMHAEKDLITKETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNN 603 Query: 182 LTPVDQAIPSASTSKKQ 232 + V + S ++ ++Q Sbjct: 604 YSHVKVTVDSDTSPRQQ 620 >Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical protein Y57G11C.24a protein. Length = 862 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = +2 Query: 2 IRHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAEL 181 +RHE K+ R E+D + PPP AV + Q Y P + P Sbjct: 464 LRHEEKQIEDEKRRMHAEKDLITKETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNN 523 Query: 182 LTPVDQAIPSASTSKKQ 232 + V + S ++ ++Q Sbjct: 524 YSHVKVTVDSDTSPRQQ 540 >Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical protein Y57G11C.24g protein. Length = 917 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = +2 Query: 2 IRHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAEL 181 +RHE K+ R E+D + PPP AV + Q Y P + P Sbjct: 519 LRHEEKQIEDEKRRMHAEKDLITKETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNN 578 Query: 182 LTPVDQAIPSASTSKKQ 232 + V + S ++ ++Q Sbjct: 579 YSHVKVTVDSDTSPRQQ 595 >AY611485-1|AAT37524.1| 740|Caenorhabditis elegans epidermal growth factor receptorpathway substrate 8 splice variant B protein. Length = 740 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = +2 Query: 2 IRHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAEL 181 +RHE K+ R E+D + PPP AV + Q Y P + P Sbjct: 544 LRHEEKQIEDEKRRMHAEKDLITKETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNN 603 Query: 182 LTPVDQAIPSASTSKKQ 232 + V + S ++ ++Q Sbjct: 604 YSHVKVTVDSDTSPRQQ 620 >AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth factor receptorpathway substrate 8 splice variant A protein. Length = 917 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/77 (24%), Positives = 31/77 (40%) Frame = +2 Query: 2 IRHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAEL 181 +RHE K+ R E+D + PPP AV + Q Y P + P Sbjct: 519 LRHEEKQIEDEKRRMHAEKDLITKETTQPVPPPAAVVTHQPITKRYDPPISISPPPQRNN 578 Query: 182 LTPVDQAIPSASTSKKQ 232 + V + S ++ ++Q Sbjct: 579 YSHVKVTVDSDTSPRQQ 595 >AL132852-3|CAN86966.1| 249|Caenorhabditis elegans Hypothetical protein Y95D11A.3 protein. Length = 249 Score = 28.3 bits (60), Expect = 5.6 Identities = 14/60 (23%), Positives = 28/60 (46%) Frame = +2 Query: 77 PKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAELLTPVDQAIPSASTSKKQLPIPIKNV 256 P ++ P + + D I DP +++ + + +DQ++PS S+ LP + V Sbjct: 60 PNDVDPNDVYLFDEETDQIHQLDPNQLKNNEEIDDVEYIDQSVPSTSSMMTSLPSTVAPV 119 >Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical protein E02A10.1 protein. Length = 418 Score = 27.9 bits (59), Expect = 7.4 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +2 Query: 50 EERD--KDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAELLT 187 EERD K K +++ P TQ+ + G PP ++G NF + T Sbjct: 89 EERDTGKKKRNREKLHPMERGFSGTQLVGQKLGAPPPLDGVNFDDFET 136 >Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical protein E02A10.1 protein. Length = 418 Score = 27.9 bits (59), Expect = 7.4 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = +2 Query: 50 EERD--KDKSPPKEIKPPPGAVESTQIDDIEYGDPPEVEGPNFAELLT 187 EERD K K +++ P TQ+ + G PP ++G NF + T Sbjct: 89 EERDTGKKKRNREKLHPMERGFSGTQLVGQKLGAPPPLDGVNFDDFET 136 >Z81070-11|CAB03006.3| 1086|Caenorhabditis elegans Hypothetical protein F26E4.10 protein. Length = 1086 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +2 Query: 5 RHERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYGDPPEV 157 RH+ + +L R Q + +PP ++ P EST + +GD P + Sbjct: 30 RHKEEMMQQLGRRFQNQPSTSSAPPDTVEKIPLPTESTSA--LPFGDSPRL 78 >Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical protein K09A9.6 protein. Length = 872 Score = 27.5 bits (58), Expect = 9.8 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +2 Query: 11 ERKRFWKLHRSRQEERDKDKS-PPKEIKPPPGAVESTQIDDIEYGDPPEVE 160 E R K H R+E++DK+K P + +P + + DD + GD + E Sbjct: 226 EPSRKQKAHNQREEKKDKNKKYQPVKEEPDLDDDDDDEDDDDDDGDDDDDE 276 >Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical protein K09A9.6 protein. Length = 872 Score = 27.5 bits (58), Expect = 9.8 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +2 Query: 11 ERKRFWKLHRSRQEERDKDKS-PPKEIKPPPGAVESTQIDDIEYGDPPEVE 160 E R K H R+E++DK+K P + +P + + DD + GD + E Sbjct: 226 EPSRKQKAHNQREEKKDKNKKYQPVKEEPDLDDDDDDEDDDDDDGDDDDDE 276 >AC006762-10|AAF60556.1| 301|Caenorhabditis elegans Hypothetical protein Y42G9A.1 protein. Length = 301 Score = 27.5 bits (58), Expect = 9.8 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +2 Query: 8 HERKRFWKLHRSRQEERDKDKSPPKEIKPPPGAVESTQIDDIEYG---DPPEVEG 163 HE KR R R+E + D S K+ +P + S DD+ G PP +G Sbjct: 243 HEVKRVLLKARRREESEESDVSFSKKPRPSSRSPASPNRDDLLLGLDRSPPSDDG 297 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,133,712 Number of Sequences: 27780 Number of extensions: 247570 Number of successful extensions: 1047 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 964 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1046 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1613473434 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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