Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0098.Seq
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.75 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   1.00 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 LYSLANSLYGHLFFLLILST 400
           L  +ANS+YG   FL +LST
Sbjct: 224 LCQVANSIYGFQNFLFVLST 243


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 641 YIQ*LIDSNNLQSTIYTVCKMSMYIKENIR 552
           Y   +   N L   I+TVC+  +YI +N++
Sbjct: 150 YFNRIFGWNILFGHIFTVCRTLIYIDDNVK 179


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 2   NYNLTTSE*ELLLDMLRICHYCQTIYSMWAIKVSY 106
           +YNL     E + D+L   H+C+T+YSM      Y
Sbjct: 426 SYNLAGMG-ETIEDLL---HFCRTMYSMKVDNAEY 456


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 543 YRHTYILFYIHRHFTYCIY 599
           + + +I+F +H  F  CIY
Sbjct: 116 FYYAFIIFTVHLLFLLCIY 134



 Score = 22.6 bits (46), Expect = 4.0
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +3

Query: 555 YILFYIHRHFTYCIY---C*L*IIAVNKLLYIVIFVKITSH 668
           +I+F +H  F  CIY   C   II    LL+   F+    H
Sbjct: 153 FIIFTVHLLFLLCIYHFFCAF-IIFTMHLLFCCAFIFFNMH 192



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 543 YRHTYILFYIHRHFTYCIYC*L*IIAVNKLLYIVIFVKITSH 668
           + + +ILF +H     CIY          LL+   F+  T H
Sbjct: 241 FYYAFILFTVHLLLLVCIY----YFYYMHLLFCCAFIIFTMH 278


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +3

Query: 756 SYYMVYGKFWXPYGPKNKV 812
           S YMVYG  W  Y     V
Sbjct: 477 SPYMVYGDQWVGYDDSESV 495


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 146 FTYRILVKNSG 178
           FTY+I V NSG
Sbjct: 482 FTYKITVNNSG 492


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +2

Query: 56  CHYCQTIYSMWAIKVSYRKT*NTIA*IKSLFTYRILVKNSGC 181
           C   +++  +  I   YR   +T+    SLF Y+I++    C
Sbjct: 211 CEQSKSVEELMNIANYYRILGDTVEIFNSLFGYQIILVIFDC 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,719
Number of Sequences: 336
Number of extensions: 3892
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)