Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0096.Seq
(835 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like p... 41 0.002
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 32 0.84
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 32 0.84
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 32 0.84
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 32 0.84
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 32 0.84
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 32 0.84
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 32 0.84
AY071210-1|AAL48832.1| 580|Drosophila melanogaster RE25570p pro... 29 7.8
AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p pro... 29 7.8
AE014298-1841|AAG22351.2| 580|Drosophila melanogaster CG4353-PB... 29 7.8
AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA... 29 7.8
>X85998-1|CAA59990.1| 110|Drosophila melanogaster elastin like
protein protein.
Length = 110
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 3 VAAALELVDPPGCRNSAR 56
VAAALELVDPPGCRNSAR
Sbjct: 6 VAAALELVDPPGCRNSAR 23
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p protein.
Length = 1521
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 GNGESGFDSGEGA*ETATTSKEGSRRA-NYPLPARGLVPNSCSPGDPLVLERPPP 1
G +G G A ++ + G + YP P+ +PN+ +P P V PPP
Sbjct: 1195 GTASAGLSGGTAASSSSPAANSGPTKGLQYPFPSHPPLPNTAAP-PPAVQPAPPP 1248
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 GNGESGFDSGEGA*ETATTSKEGSRRA-NYPLPARGLVPNSCSPGDPLVLERPPP 1
G +G G A ++ + G + YP P+ +PN+ +P P V PPP
Sbjct: 1673 GTASAGLSGGTAASSSSPAANSGPTKGLQYPFPSHPPLPNTAAP-PPAVQPAPPP 1726
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 GNGESGFDSGEGA*ETATTSKEGSRRA-NYPLPARGLVPNSCSPGDPLVLERPPP 1
G +G G A ++ + G + YP P+ +PN+ +P P V PPP
Sbjct: 1679 GTASAGLSGGTAASSSSPAANSGPTKGLQYPFPSHPPLPNTAAP-PPAVQPAPPP 1732
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 GNGESGFDSGEGA*ETATTSKEGSRRA-NYPLPARGLVPNSCSPGDPLVLERPPP 1
G +G G A ++ + G + YP P+ +PN+ +P P V PPP
Sbjct: 1622 GTASAGLSGGTAASSSSPAANSGPTKGLQYPFPSHPPLPNTAAP-PPAVQPAPPP 1675
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 GNGESGFDSGEGA*ETATTSKEGSRRA-NYPLPARGLVPNSCSPGDPLVLERPPP 1
G +G G A ++ + G + YP P+ +PN+ +P P V PPP
Sbjct: 1622 GTASAGLSGGTAASSSSPAANSGPTKGLQYPFPSHPPLPNTAAP-PPAVQPAPPP 1675
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 GNGESGFDSGEGA*ETATTSKEGSRRA-NYPLPARGLVPNSCSPGDPLVLERPPP 1
G +G G A ++ + G + YP P+ +PN+ +P P V PPP
Sbjct: 1679 GTASAGLSGGTAASSSSPAANSGPTKGLQYPFPSHPPLPNTAAP-PPAVQPAPPP 1732
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 162 GNGESGFDSGEGA*ETATTSKEGSRRA-NYPLPARGLVPNSCSPGDPLVLERPPP 1
G +G G A ++ + G + YP P+ +PN+ +P P V PPP
Sbjct: 1679 GTASAGLSGGTAASSSSPAANSGPTKGLQYPFPSHPPLPNTAAP-PPAVQPAPPP 1732
>AY071210-1|AAL48832.1| 580|Drosophila melanogaster RE25570p
protein.
Length = 580
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 587 PVNCNTTH-YRANWVPGPPSCRLTSSYSLSQ 498
PV +T+ + +N+VP PPS TSS S +Q
Sbjct: 219 PVGVTSTNPFHSNYVPPPPSTHSTSSQSSTQ 249
>AY069695-1|AAL39840.1| 1178|Drosophila melanogaster LD46661p
protein.
Length = 1178
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 587 PVNCNTTH-YRANWVPGPPSCRLTSSYSLSQ 498
PV +T+ + +N+VP PPS TSS S +Q
Sbjct: 817 PVGVTSTNPFHSNYVPPPPSTHSTSSQSSTQ 847
>AE014298-1841|AAG22351.2| 580|Drosophila melanogaster CG4353-PB,
isoform B protein.
Length = 580
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 587 PVNCNTTH-YRANWVPGPPSCRLTSSYSLSQ 498
PV +T+ + +N+VP PPS TSS S +Q
Sbjct: 219 PVGVTSTNPFHSNYVPPPPSTHSTSSQSSTQ 249
>AE014298-1840|AAN09646.1| 1178|Drosophila melanogaster CG4353-PA,
isoform A protein.
Length = 1178
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 587 PVNCNTTH-YRANWVPGPPSCRLTSSYSLSQ 498
PV +T+ + +N+VP PPS TSS S +Q
Sbjct: 817 PVGVTSTNPFHSNYVPPPPSTHSTSSQSSTQ 847
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,149,093
Number of Sequences: 53049
Number of extensions: 875419
Number of successful extensions: 2305
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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