Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0095.Seq
         (802 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    63   7e-09
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    46   0.001
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    41   0.032
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    34   3.6  
UniRef50_A1DG84 Cluster: Protein kinase, putative; n=10; Pezizom...    34   3.6  
UniRef50_Q5KNU3 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 63.3 bits (147), Expect = 7e-09
 Identities = 35/62 (56%), Positives = 38/62 (61%)
 Frame = +2

Query: 326 SFXTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVPYRYXSSLPPRAG 505
           SF TA  L+Y            RLALQ  LVK FKV SF+L+GL RV Y Y SSLPPR G
Sbjct: 42  SFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVG 101

Query: 506 SG 511
           SG
Sbjct: 102 SG 103


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +1

Query: 523 LLPSLDVVAXSQAPSPESNPDSP 591
           LLPSLDVVA SQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 41.1 bits (92), Expect = 0.032
 Identities = 28/69 (40%), Positives = 35/69 (50%)
 Frame = +1

Query: 364 SWNYRGCWHQTCPPIVPR*NI*SVLIPITRPRKSPVSLXXVTTSPCREW*FARLLPSLDV 543
           SWNYR CWHQT P +          I  T+  +   SL     S  +    +RLL  +D+
Sbjct: 7   SWNYRSCWHQTGPLLGFGTVENRTPIHSTKRHQWNWSLPPPKVSSGK---VSRLLLPVDI 63

Query: 544 VAXSQAPSP 570
           VA SQAPSP
Sbjct: 64  VAISQAPSP 72


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 15/19 (78%), Positives = 15/19 (78%)
 Frame = +1

Query: 454 PRKSPVSLXXVTTSPCREW 510
           PRKSPV L  VTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A1DG84 Cluster: Protein kinase, putative; n=10;
           Pezizomycotina|Rep: Protein kinase, putative -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 1077

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 21/53 (39%), Positives = 26/53 (49%)
 Frame = +1

Query: 454 PRKSPVSLXXVTTSPCREW*FARLLPSLDVVAXSQAPSPESNPDSPLTRDKPW 612
           P K P++L      P  EW   RL+P  DVV    +PSP SNP S      P+
Sbjct: 485 PCKRPINLFPTGQKPMSEWERPRLMPQADVV---PSPSP-SNPPSARPTSGPF 533


>UniRef50_Q5KNU3 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 1339

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +1

Query: 526 LPSLDVVAXSQAPSP---ESNPDSPLTRDKP 609
           +PSLD +  S+ PSP   ES P  PLT  KP
Sbjct: 14  VPSLDTIPQSEVPSPQPCESPPSEPLTPSKP 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,635,337
Number of Sequences: 1657284
Number of extensions: 11606987
Number of successful extensions: 23599
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23590
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)