Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0094.Seq
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.77 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   7.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.4  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
 Frame = +2

Query: 563 HRXKESTL*SQGPR*QALRXQXSKCPLPTP-LRRKSLTX*KFPFPSPTLXEEKGPXFPLK 739
           HR KE  L   G   Q +    S  P P P L        K   P PT+ +     FP  
Sbjct: 163 HRYKEEALQGDGRMRQHVMHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTT 222

Query: 740 XPS--LKVPHP 766
             S  L+ P+P
Sbjct: 223 SSSSALESPNP 233


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = +2

Query: 563 HRXKESTL*SQGPR*QALRXQXSKCPLPTP-LRRKSLTX*KFPFPSPTLXEEKGPXFPLK 739
           HR KE  L   G   Q +    S  P P P L        K   P PT+ +     FP  
Sbjct: 163 HRYKEEALQGDGRMRQHVMHNLSSVPQPQPVLPTYKWMQVKRNVPKPTVPKIPPAEFPTT 222

Query: 740 XPSLKVPHP 766
             S  +  P
Sbjct: 223 SSSSALESP 231


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 585 YEVKVHVDKPYEXXVQS 635
           Y+VK+  D PYE  + S
Sbjct: 886 YKVKLEYDGPYETSISS 902


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 563 HRXKESTL*SQGPR*QALRXQXSKCPLPTPL 655
           HR KE  L   G   Q +    S  P P P+
Sbjct: 163 HRYKEEALQGDGRMRQHVMHNLSSVPQPQPV 193


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 406 TGTFFTTSTVLMCSW 362
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,202
Number of Sequences: 336
Number of extensions: 2520
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)