Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0094.Seq
         (863 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    29   0.14 
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    27   0.97 
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.3  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 634 VPTPYTVEKEIPYEXKVPVPQPYTV-XRKRSPVSLEI 741
           VP P+ V   +P+  KV +PQPY +      P+ + I
Sbjct: 176 VPVPHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPI 212



 Score = 28.3 bits (60), Expect = 0.32
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 637 PTPYTVEKEIPYEXKVPVP 693
           P PYTVEK  P E + P P
Sbjct: 223 PVPYTVEKPYPIEVEKPFP 241



 Score = 27.1 bits (57), Expect = 0.74
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +1

Query: 637 PTPYTVEKEIPYEX----KVPVPQPYTV 708
           P P  VEK  P E     +VPVP+PY V
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258



 Score = 25.4 bits (53), Expect = 2.2
 Identities = 18/44 (40%), Positives = 18/44 (40%)
 Frame = +3

Query: 480 PQPYTVEKXVPLPSXXTSNTQYTYLKPXTVXKKVPYEVKVHVDK 611
           P PYTVEK  P P           LK   V    PY V V V K
Sbjct: 223 PVPYTVEK--PYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYK 264



 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 558 PXTVXKKVPYEVKVHVDKPYEXXV 629
           P  V   VP+ VKV++ +PY   V
Sbjct: 179 PHPVPIAVPHYVKVYIPQPYPLQV 202


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 26.6 bits (56), Expect = 0.97
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 457 GTFFSTV*GTCFSTVYGTGTFFTTSTVLMCSWC 359
           G F S +  TCF  +    T  +TST    S+C
Sbjct: 19  GAFLSNLNATCFRCICDASTGCSTSTTCRQSYC 51


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 16/62 (25%), Positives = 30/62 (48%)
 Frame = -3

Query: 267 SCSFPSEVVSFLVTEADTFVPSIAFVTAVAFIATSEIMSSIRSYVIDAPFVLFLLFDCFG 88
           S + P   V+ ++ + D  +       A A  A  + + S R +  +APF+++L  D  G
Sbjct: 423 SSAGPKPYVNQILHKLDLTIDEEGTEGAAATSALVDRIGSQRQFNGNAPFLIYLRHDATG 482

Query: 87  VP 82
           +P
Sbjct: 483 LP 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,188
Number of Sequences: 2352
Number of extensions: 9752
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)