Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0093.Seq
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphat... 33 0.66
L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphat... 33 0.66
BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein. 33 0.66
BC106715-1|AAI06716.1| 1505|Homo sapiens PTPRD protein protein. 33 0.66
BC106714-1|AAI06715.1| 1506|Homo sapiens PTPRD protein protein. 33 0.66
BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein. 33 0.66
AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine phosph... 33 0.66
AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine phosph... 33 0.66
AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine phosph... 33 0.66
AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine phosph... 33 0.66
AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine phosph... 33 0.66
AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine phosph... 33 0.66
AB208869-1|BAD92106.1| 1478|Homo sapiens protein tyrosine phosph... 33 0.66
BC111715-1|AAI11716.1| 937|Homo sapiens PTPRH protein protein. 31 2.7
X90568-1|CAA62188.1|26926|Homo sapiens titin protein. 31 3.5
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 31 3.5
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 31 3.5
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 4.7
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 4.7
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 4.7
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 4.7
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 4.7
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 4.7
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 31 4.7
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL... 31 4.7
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 31 4.7
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 31 4.7
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 31 4.7
U41725-1|AAD09360.1| 1502|Homo sapiens PTPsigma-(brain) protein. 30 6.2
U40317-1|AAC50567.1| 1911|Homo sapiens PTPsigma protein. 30 6.2
U35234-1|AAC50299.1| 1948|Homo sapiens protein tyrosine phosphat... 30 6.2
BC104812-1|AAI04813.1| 1501|Homo sapiens protein tyrosine phosph... 30 6.2
AC005788-1|AAC62834.1| 1399|Homo sapiens PTPsigma [AA 524- 1926]... 30 6.2
AC005338-1|AAC27825.1| 475|Homo sapiens PTPsigma, partial CDS p... 30 6.2
AB209333-1|BAD92570.1| 1560|Homo sapiens protein tyrosine phosph... 30 6.2
>X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 1523
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 127 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 163
>L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphatase
delta protein.
Length = 1912
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein.
Length = 1496
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 510 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 546
>BC106715-1|AAI06716.1| 1505|Homo sapiens PTPRD protein protein.
Length = 1505
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>BC106714-1|AAI06715.1| 1506|Homo sapiens PTPRD protein protein.
Length = 1506
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein.
Length = 1505
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 506 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 542
>AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine
phosphatase receptor type D protein.
Length = 1912
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 516 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 552
>AB208869-1|BAD92106.1| 1478|Homo sapiens protein tyrosine
phosphatase, receptor type, D isoform 4 precursor
variant protein.
Length = 1478
Score = 33.5 bits (73), Expect = 0.66
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYE 273
P + LN A E TS+ L+W PP+ I N EL+Y+
Sbjct: 489 PGQPLNFKAE--PESETSILLSWTPPRSDTIANYELVYK 525
>BC111715-1|AAI11716.1| 937|Homo sapiens PTPRH protein protein.
Length = 937
Score = 31.5 bits (68), Expect = 2.7
Identities = 32/124 (25%), Positives = 53/124 (42%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLYEVHYSNVIXRLNPXDMSNDTKI 336
P+ NLT + +S+ L+W+ P G QN SN + + +T+
Sbjct: 30 PNPGRNLTVET--QTTSSISLSWEVPDGLDSQN---------SNYWVQCTGDGGTTETRN 78
Query: 337 ITKXTSVQIDNLXECESYSFTVGLLXGPXAXIIXIVTRENAKAPVKNLIAVYDXXXAAXX 516
T T+V +D L Y+ +V + + IVT A PV+NL V ++
Sbjct: 79 TTA-TNVTVDGLGPGSLYTCSVWVEKDGVNSSVEIVTSATAPNPVRNL-TVEAQTNSSIA 136
Query: 517 ITWD 528
+TW+
Sbjct: 137 LTWE 140
>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
Length = 26926
Score = 31.1 bits (67), Expect = 3.5
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 121 RTIHAAVKNRSEPDETLNLTAMLLKEKRTSVHLAWDPP---KGAAIQNXELLYEVHYSNV 291
+T V+ P +NLT + + K+ SV L+W+PP GA I N Y V
Sbjct: 18690 KTAFVNVRVLDSPSAPVNLT--IREVKKDSVTLSWEPPLIDGGAKITN----YIVEKRET 18743
Query: 292 IXRLNPXDMSNDTKIITKXTSVQIDNLXECESYSFTV 402
+ +N TK T+ +I+NL E SY F V
Sbjct: 18744 TRKAYATITNNCTK-----TTFRIENLQEGCSYYFRV 18775
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 31.1 bits (67), Expect = 3.5
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 121 RTIHAAVKNRSEPDETLNLTAMLLKEKRTSVHLAWDPP---KGAAIQNXELLYEVHYSNV 291
+T V+ P +NLT + + K+ SV L+W+PP GA I N Y V
Sbjct: 26114 KTAFVNVRVLDSPSAPVNLT--IREVKKDSVTLSWEPPLIDGGAKITN----YIVEKRET 26167
Query: 292 IXRLNPXDMSNDTKIITKXTSVQIDNLXECESYSFTV 402
+ +N TK T+ +I+NL E SY F V
Sbjct: 26168 TRKAYATITNNCTK-----TTFRIENLQEGCSYYFRV 26199
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 31.1 bits (67), Expect = 3.5
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +1
Query: 121 RTIHAAVKNRSEPDETLNLTAMLLKEKRTSVHLAWDPP---KGAAIQNXELLYEVHYSNV 291
+T V+ P +NLT + + K+ SV L+W+PP GA I N Y V
Sbjct: 18690 KTAFVNVRVLDSPSAPVNLT--IREVKKDSVTLSWEPPLIDGGAKITN----YIVEKRET 18743
Query: 292 IXRLNPXDMSNDTKIITKXTSVQIDNLXECESYSFTV 402
+ +N TK T+ +I+NL E SY F V
Sbjct: 18744 TRKAYATITNNCTK-----TTFRIENLQEGCSYYFRV 18775
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 1059 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1089
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 808 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 838
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 1059 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1089
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 1059 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1089
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 1059 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1089
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 808 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 838
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 1488 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1518
>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
ELD/OSA1 protein.
Length = 1740
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 1063 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1093
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 809 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 839
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 1280 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1310
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 30.7 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 503 TPQXXSLGMRTVMPTXPSYHIXXP*PKPPGI 595
+P S+ M+ VMPT P+ + P P+PP I
Sbjct: 808 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 838
>U41725-1|AAD09360.1| 1502|Homo sapiens PTPsigma-(brain) protein.
Length = 1502
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLY 270
P + +NL A E TS+ L+W PP+ +I ELL+
Sbjct: 513 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 548
>U40317-1|AAC50567.1| 1911|Homo sapiens PTPsigma protein.
Length = 1911
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLY 270
P + +NL A E TS+ L+W PP+ +I ELL+
Sbjct: 513 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 548
>U35234-1|AAC50299.1| 1948|Homo sapiens protein tyrosine phosphatase
sigma protein.
Length = 1948
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLY 270
P + +NL A E TS+ L+W PP+ +I ELL+
Sbjct: 525 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 560
>BC104812-1|AAI04813.1| 1501|Homo sapiens protein tyrosine
phosphatase, receptor type, S protein.
Length = 1501
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLY 270
P + +NL A E TS+ L+W PP+ +I ELL+
Sbjct: 512 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 547
>AC005788-1|AAC62834.1| 1399|Homo sapiens PTPsigma [AA 524- 1926]
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLY 270
P + +NL A E TS+ L+W PP+ +I ELL+
Sbjct: 2 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 37
>AC005338-1|AAC27825.1| 475|Homo sapiens PTPsigma, partial CDS
protein.
Length = 475
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLY 270
P + +NL A E TS+ L+W PP+ +I ELL+
Sbjct: 386 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 421
>AB209333-1|BAD92570.1| 1560|Homo sapiens protein tyrosine
phosphatase, receptor type, sigma isoform 3 precursor
variant protein.
Length = 1560
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 157 PDETLNLTAMLLKEKRTSVHLAWDPPKGAAIQNXELLY 270
P + +NL A E TS+ L+W PP+ +I ELL+
Sbjct: 538 PGQPMNLRAEARSE--TSITLSWSPPRQESIIKYELLF 573
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.131 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,117,703
Number of Sequences: 237096
Number of extensions: 1502656
Number of successful extensions: 2651
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2650
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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