BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0092.Seq (848 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 54 2e-07 SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06 SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 48 1e-05 SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 47 2e-05 SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 46 3e-05 SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04 SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04 SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04 SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04 SB_47462| Best HMM Match : Ras (HMM E-Value=0) 41 0.001 SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 41 0.001 SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 40 0.003 SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004 SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006 SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.008 SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 35 0.073 SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29 SB_8804| Best HMM Match : RGS (HMM E-Value=1.5e-37) 31 1.6 SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 31 1.6 SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 29 3.6 SB_47002| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16) 29 4.8 SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8 SB_34927| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3 SB_9216| Best HMM Match : Connexin (HMM E-Value=1.5) 29 6.3 SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5) 28 8.3 SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) 28 8.3 >SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 252 Score = 53.6 bits (123), Expect = 2e-07 Identities = 30/97 (30%), Positives = 46/97 (47%) Frame = -1 Query: 611 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGE 432 P + IV+G V ++AFL CCGA++ES CM+ TY + + + RE + Sbjct: 59 PILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEK 118 Query: 431 HYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGN 321 + R E + +A E+ R F+CCGN Sbjct: 119 NLHGDIRSTMNEYHLSGHDAVTRAIDEIHRDFKCCGN 155 >SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 341 Score = 49.6 bits (113), Expect = 3e-06 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 7/130 (5%) Frame = -1 Query: 641 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASS 462 ++ + A GP + I VG ++ ++AFLGCCGA +E+ CM++ + + + Sbjct: 44 EIASVNYATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILE---IVG 100 Query: 461 SSLRREHQGEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAINY------- 303 +L ++ + + I K I N E +++Q +F+CCG ++ Sbjct: 101 GALAYNNKDKIENRLDKDILKAI-ENYPGKNEKSINDMQTKFKCCGADNYTDWQSNIKMK 159 Query: 302 GQFTLPESCC 273 ++P+SCC Sbjct: 160 NSSSVPDSCC 169 >SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 280 Score = 48.0 bits (109), Expect = 1e-05 Identities = 28/94 (29%), Positives = 45/94 (47%) Frame = -1 Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGEHY 426 IF V+G +MF I F GC GA+RE+ C + Y TS + LC L + ++ + + Sbjct: 80 IFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVF---LCLILLIACGAVAYTQKDKVQ 136 Query: 425 GWRRRVIQKEI*PNADEAAEAVFSELQRQFECCG 324 + R+ Q D + + +Q +CCG Sbjct: 137 ALKERLKQDLKKYLDDPLNQDLIDFMQTLLKCCG 170 >SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) Length = 642 Score = 46.8 bits (106), Expect = 2e-05 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Frame = -1 Query: 614 GPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREH-Q 438 G + I VG ++ +IAF GCCGA +E+ CM++ + + A + ++ Q Sbjct: 406 GSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQ 465 Query: 437 GEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAIN---YGQFTL---PESC 276 + R I KE N A +A +Q FECCG G + YGQ P SC Sbjct: 466 SDLTDDIIRNI-KEYPKNNKAAIDA----MQMDFECCGAKGPSDWTFYGQMKYKAGPGSC 520 Query: 275 CVKKSILLPSPATTARSTPR 216 C K + P T PR Sbjct: 521 CGKPNNDACLPGTRNSKLPR 540 >SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) Length = 211 Score = 46.4 bits (105), Expect = 3e-05 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 17/137 (12%) Frame = -1 Query: 620 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY-------ATSCW*SSLCKW*LASS 462 A G + I VG ++ +++F GC GA +E+ CM+ T+ T +++ + Sbjct: 53 ATGSRLVIAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGK 112 Query: 461 SSLRREH---QGEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAINY---- 303 +SL + + E + ++ + + + F LQ + +CCG G +++ Sbjct: 113 NSLNSDSVKVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDWKASK 172 Query: 302 ---GQFTLPESCCVKKS 261 G T+P+SCCV K+ Sbjct: 173 KYNGTSTVPDSCCVVKA 189 >SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 140 Score = 44.4 bits (100), Expect = 1e-04 Identities = 19/40 (47%), Positives = 26/40 (65%) Frame = -1 Query: 641 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMV 522 DL A G I I GA++ +I+F GCCGAI+ES C++ Sbjct: 16 DLQSVKYATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55 >SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 514 Score = 44.0 bits (99), Expect = 2e-04 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 8/131 (6%) Frame = -1 Query: 641 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASS 462 +L G I I VGA + +++F GCCGAI+E C++ T+ + + + Sbjct: 316 ELQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTAL 375 Query: 461 SSLRREHQGEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAINY--GQFT- 291 + R E G E + +Q++ +CCG G ++ +T Sbjct: 376 GYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTK 435 Query: 290 -----LPESCC 273 +P+SCC Sbjct: 436 GNHSIVPDSCC 446 >SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 313 Score = 43.2 bits (97), Expect = 3e-04 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -1 Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSC 501 IF+ +G ++FVI GC GA+RE+ C++ Y C Sbjct: 106 IFLALGGLLFVITIFGCIGALRENRCLLTAYIWMC 140 >SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 426 Score = 42.7 bits (96), Expect = 4e-04 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1 Query: 620 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 516 ++ W I GA + + F GCCGA++ES CM+ T Sbjct: 311 SIPAWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345 >SB_47462| Best HMM Match : Ras (HMM E-Value=0) Length = 385 Score = 40.7 bits (91), Expect = 0.001 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = -1 Query: 635 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAT 507 L +H A +I I +G ++ +I F+GCCGA++E C++ T T Sbjct: 208 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKTIKT 251 Score = 33.9 bits (74), Expect = 0.17 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = -3 Query: 162 IAGVALGVACVEVVGALFALCLANSIRN 79 I GVALG+A +++G F+ CLA+++ N Sbjct: 351 IGGVALGLAVFQLIGIAFSCCLASTLHN 378 >SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) Length = 299 Score = 40.7 bits (91), Expect = 0.001 Identities = 25/94 (26%), Positives = 48/94 (51%) Frame = -1 Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGEHY 426 + ++VG ++F+IA +GC GA+RE+ ++ Y + +LC L S+ + H+ + Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAV---TLCLILLVSAGTAVYIHRDKVV 140 Query: 425 GWRRRVIQKEI*PNADEAAEAVFSELQRQFECCG 324 + +Q P+ E + + LQ +CCG Sbjct: 141 AKLKDDLQHYRDPD-KENFQFLIDRLQTNLKCCG 173 >SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) Length = 187 Score = 39.5 bits (88), Expect = 0.003 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Frame = -1 Query: 635 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 516 L +H A +I I +G ++ +I F+GCCGA++E C++ T Sbjct: 66 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106 >SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 296 Score = 39.1 bits (87), Expect = 0.004 Identities = 25/94 (26%), Positives = 47/94 (50%) Frame = -1 Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGEHY 426 + ++VG ++F+IA +GC GA+RE+ ++ Y + +LC L S+ HQ + Sbjct: 84 VILIVGILLFLIATVGCIGALRENTILLAIYGGAV---TLCLIFLVSAGIAVYMHQDKVV 140 Query: 425 GWRRRVIQKEI*PNADEAAEAVFSELQRQFECCG 324 + ++ P+ E + + LQ +CCG Sbjct: 141 EKLKDDLKHYRDPD-KENFQFLIDRLQTNLKCCG 173 >SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 333 Score = 38.7 bits (86), Expect = 0.006 Identities = 13/26 (50%), Positives = 21/26 (80%) Frame = -1 Query: 599 IVVGAVMFVIAFLGCCGAIRESHCMV 522 I+VG +MF++ F GC GA+RE+ C++ Sbjct: 51 IIVGGIMFILGFSGCIGALRENICLL 76 >SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) Length = 669 Score = 38.3 bits (85), Expect = 0.008 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = -1 Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVV 519 I I GA++ I F+GCCGA++E+ C ++ Sbjct: 201 IMIAAGALVMFIGFVGCCGAVKENKCFLL 229 >SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) Length = 150 Score = 35.1 bits (77), Expect = 0.073 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -1 Query: 626 HLAVGPWIFIVV-GAVMFVIAFLGCCGAIRES 534 +LA P + + + G +MFVI+F GC GA+RE+ Sbjct: 13 NLATDPAVMLAIAGVLMFVISFSGCLGALREN 44 >SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 400 Score = 33.1 bits (72), Expect = 0.29 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 472 NHHLHNDDHQQEVAYVTTMQ*LSRIAPQHPKNAITNITAPTTM 600 NH+ HN H+ + +TT + I H +N I IT TT+ Sbjct: 235 NHYSHNHHHRNIIFTITTTTTIVTITINHHRNIIFTITTTTTI 277 >SB_8804| Best HMM Match : RGS (HMM E-Value=1.5e-37) Length = 712 Score = 30.7 bits (66), Expect = 1.6 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = -3 Query: 288 ARVLLRQEEHPPTFAGNNCTVDAANPGCGPKIGELYQKWNK 166 +R+ R E++PPT N VDA + P+ Y W + Sbjct: 310 SRLTNRSEQNPPTITENEDQVDAQHSTASPRNTSNYSPWER 350 >SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) Length = 286 Score = 30.7 bits (66), Expect = 1.6 Identities = 11/41 (26%), Positives = 23/41 (56%) Frame = -1 Query: 635 LKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 513 L++ + P + G +++I F GC GA++E+ + +Y Sbjct: 65 LQSFMLYMPTLLFFTGFSLYLIVFFGCVGALKENTLFLASY 105 >SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) Length = 919 Score = 29.5 bits (63), Expect = 3.6 Identities = 9/33 (27%), Positives = 20/33 (60%) Frame = -1 Query: 611 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 513 P + I G ++ ++ +GC I+E+ ++V+Y Sbjct: 60 PGLMIAAGCLVIIVCVVGCVAVIKENRFILVSY 92 >SB_47002| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16) Length = 894 Score = 29.1 bits (62), Expect = 4.8 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 333 MLR*HWRY-QLRPVHVARVLLRQEEHPPTFAGNNCT 229 +LR HWR QL+ +H RVL PP AG++ T Sbjct: 843 LLRIHWRQRQLQHMHRRRVLSMTVCRPPAVAGSSKT 878 >SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1564 Score = 29.1 bits (62), Expect = 4.8 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = -1 Query: 290 LPESCCVKKSILLPSPATTARSTPRI 213 L SC V + + PSPA T RS PR+ Sbjct: 389 LVASCKVPEKVNAPSPAQTLRSLPRV 414 >SB_34927| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 90 Score = 28.7 bits (61), Expect = 6.3 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -1 Query: 590 GAVMFVIAFLGCCGAIRESHCMVVTYATS 504 G +FV+ F CCG C+V+ Y +S Sbjct: 10 GGRIFVLTFCCCCGLFLLLFCLVILYLSS 38 >SB_9216| Best HMM Match : Connexin (HMM E-Value=1.5) Length = 334 Score = 28.7 bits (61), Expect = 6.3 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -1 Query: 263 SILLPSPATTARSTPRIPAAVPRSASSTRNG 171 S+ P+ T R R PA+ PR++ S RNG Sbjct: 303 SLRQPASRATPRQPARQPASQPRNSHSARNG 333 >SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5) Length = 168 Score = 28.3 bits (60), Expect = 8.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 Query: 543 YRSTASQERDHEHYSPDD 596 YR T SQ R H H++PD+ Sbjct: 104 YRRTRSQLRPHHHFAPDE 121 >SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08) Length = 399 Score = 28.3 bits (60), Expect = 8.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +3 Query: 543 YRSTASQERDHEHYSPDD 596 YR T SQ R H H++PD+ Sbjct: 336 YRRTRSQLRPHHHFAPDE 353 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,867,735 Number of Sequences: 59808 Number of extensions: 486760 Number of successful extensions: 1545 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1382 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1542 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2407378809 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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