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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0092.Seq
         (848 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)                54   2e-07
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)               50   3e-06
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)                48   1e-05
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)            47   2e-05
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)      46   3e-05
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   2e-04
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   3e-04
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   4e-04
SB_47462| Best HMM Match : Ras (HMM E-Value=0)                         41   0.001
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)                41   0.001
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)             40   0.003
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.004
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.006
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)                 38   0.008
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)                  35   0.073
SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.29 
SB_8804| Best HMM Match : RGS (HMM E-Value=1.5e-37)                    31   1.6  
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)          31   1.6  
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)          29   3.6  
SB_47002| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16)                 29   4.8  
SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_34927| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.3  
SB_9216| Best HMM Match : Connexin (HMM E-Value=1.5)                   29   6.3  
SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5)                28   8.3  
SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)                   28   8.3  

>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 252

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 46/97 (47%)
 Frame = -1

Query: 611 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGE 432
           P + IV+G V  ++AFL CCGA++ES CM+ TY          +      + + RE   +
Sbjct: 59  PILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEK 118

Query: 431 HYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGN 321
           +     R    E   +  +A      E+ R F+CCGN
Sbjct: 119 NLHGDIRSTMNEYHLSGHDAVTRAIDEIHRDFKCCGN 155


>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 341

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
 Frame = -1

Query: 641 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASS 462
           ++   + A GP + I VG ++ ++AFLGCCGA +E+ CM++ +        + +      
Sbjct: 44  EIASVNYATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILE---IVG 100

Query: 461 SSLRREHQGEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAINY------- 303
            +L   ++ +      + I K I  N     E   +++Q +F+CCG     ++       
Sbjct: 101 GALAYNNKDKIENRLDKDILKAI-ENYPGKNEKSINDMQTKFKCCGADNYTDWQSNIKMK 159

Query: 302 GQFTLPESCC 273
              ++P+SCC
Sbjct: 160 NSSSVPDSCC 169


>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 280

 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 28/94 (29%), Positives = 45/94 (47%)
 Frame = -1

Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGEHY 426
           IF V+G +MF I F GC GA+RE+ C +  Y TS +   LC   L +  ++    + +  
Sbjct: 80  IFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVF---LCLILLIACGAVAYTQKDKVQ 136

Query: 425 GWRRRVIQKEI*PNADEAAEAVFSELQRQFECCG 324
             + R+ Q       D   + +   +Q   +CCG
Sbjct: 137 ALKERLKQDLKKYLDDPLNQDLIDFMQTLLKCCG 170


>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
          Length = 642

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
 Frame = -1

Query: 614 GPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREH-Q 438
           G  + I VG ++ +IAF GCCGA +E+ CM++ +          +   A    + ++  Q
Sbjct: 406 GSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQ 465

Query: 437 GEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAIN---YGQFTL---PESC 276
            +      R I KE   N   A +A    +Q  FECCG  G  +   YGQ      P SC
Sbjct: 466 SDLTDDIIRNI-KEYPKNNKAAIDA----MQMDFECCGAKGPSDWTFYGQMKYKAGPGSC 520

Query: 275 CVKKSILLPSPATTARSTPR 216
           C K +     P T     PR
Sbjct: 521 CGKPNNDACLPGTRNSKLPR 540


>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
          Length = 211

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 17/137 (12%)
 Frame = -1

Query: 620 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY-------ATSCW*SSLCKW*LASS 462
           A G  + I VG ++ +++F GC GA +E+ CM+ T+        T    +++  +     
Sbjct: 53  ATGSRLVIAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGK 112

Query: 461 SSLRREH---QGEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAINY---- 303
           +SL  +    + E      + ++ +   +  +     F  LQ + +CCG  G +++    
Sbjct: 113 NSLNSDSVKVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDWKASK 172

Query: 302 ---GQFTLPESCCVKKS 261
              G  T+P+SCCV K+
Sbjct: 173 KYNGTSTVPDSCCVVKA 189


>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = -1

Query: 641 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMV 522
           DL     A G  I I  GA++ +I+F GCCGAI+ES C++
Sbjct: 16  DLQSVKYATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55


>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
 Frame = -1

Query: 641 DLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASS 462
           +L       G  I I VGA + +++F GCCGAI+E  C++ T+    +     +    + 
Sbjct: 316 ELQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTAL 375

Query: 461 SSLRREHQGEHYGWRRRVIQKEI*PNADEAAEAVFSELQRQFECCGNTGAINY--GQFT- 291
             + R    E  G               E     +  +Q++ +CCG  G  ++    +T 
Sbjct: 376 GYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTK 435

Query: 290 -----LPESCC 273
                +P+SCC
Sbjct: 436 GNHSIVPDSCC 446


>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 313

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -1

Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSC 501
           IF+ +G ++FVI   GC GA+RE+ C++  Y   C
Sbjct: 106 IFLALGGLLFVITIFGCIGALRENRCLLTAYIWMC 140


>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 426

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 620 AVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 516
           ++  W  I  GA +  + F GCCGA++ES CM+ T
Sbjct: 311 SIPAWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345


>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
          Length = 385

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -1

Query: 635 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAT 507
           L +H  A   +I I +G ++ +I F+GCCGA++E  C++ T  T
Sbjct: 208 LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKTIKT 251



 Score = 33.9 bits (74), Expect = 0.17
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -3

Query: 162 IAGVALGVACVEVVGALFALCLANSIRN 79
           I GVALG+A  +++G  F+ CLA+++ N
Sbjct: 351 IGGVALGLAVFQLIGIAFSCCLASTLHN 378


>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
          Length = 299

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/94 (26%), Positives = 48/94 (51%)
 Frame = -1

Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGEHY 426
           + ++VG ++F+IA +GC GA+RE+  ++  Y  +    +LC   L S+ +    H+ +  
Sbjct: 84  VILIVGILLFLIATVGCIGALRENTILLAIYGGAV---TLCLILLVSAGTAVYIHRDKVV 140

Query: 425 GWRRRVIQKEI*PNADEAAEAVFSELQRQFECCG 324
              +  +Q    P+  E  + +   LQ   +CCG
Sbjct: 141 AKLKDDLQHYRDPD-KENFQFLIDRLQTNLKCCG 173


>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
          Length = 187

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = -1

Query: 635 LKTH-LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVT 516
           L +H  A   +I I +G ++ +I F+GCCGA++E  C++ T
Sbjct: 66  LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 106


>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 296

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 25/94 (26%), Positives = 47/94 (50%)
 Frame = -1

Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVVTYATSCW*SSLCKW*LASSSSLRREHQGEHY 426
           + ++VG ++F+IA +GC GA+RE+  ++  Y  +    +LC   L S+      HQ +  
Sbjct: 84  VILIVGILLFLIATVGCIGALRENTILLAIYGGAV---TLCLIFLVSAGIAVYMHQDKVV 140

Query: 425 GWRRRVIQKEI*PNADEAAEAVFSELQRQFECCG 324
              +  ++    P+  E  + +   LQ   +CCG
Sbjct: 141 EKLKDDLKHYRDPD-KENFQFLIDRLQTNLKCCG 173


>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 333

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 13/26 (50%), Positives = 21/26 (80%)
 Frame = -1

Query: 599 IVVGAVMFVIAFLGCCGAIRESHCMV 522
           I+VG +MF++ F GC GA+RE+ C++
Sbjct: 51  IIVGGIMFILGFSGCIGALRENICLL 76


>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
          Length = 669

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = -1

Query: 605 IFIVVGAVMFVIAFLGCCGAIRESHCMVV 519
           I I  GA++  I F+GCCGA++E+ C ++
Sbjct: 201 IMIAAGALVMFIGFVGCCGAVKENKCFLL 229


>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
          Length = 150

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = -1

Query: 626 HLAVGPWIFIVV-GAVMFVIAFLGCCGAIRES 534
           +LA  P + + + G +MFVI+F GC GA+RE+
Sbjct: 13  NLATDPAVMLAIAGVLMFVISFSGCLGALREN 44


>SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 400

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 472 NHHLHNDDHQQEVAYVTTMQ*LSRIAPQHPKNAITNITAPTTM 600
           NH+ HN  H+  +  +TT   +  I   H +N I  IT  TT+
Sbjct: 235 NHYSHNHHHRNIIFTITTTTTIVTITINHHRNIIFTITTTTTI 277


>SB_8804| Best HMM Match : RGS (HMM E-Value=1.5e-37)
          Length = 712

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 288 ARVLLRQEEHPPTFAGNNCTVDAANPGCGPKIGELYQKWNK 166
           +R+  R E++PPT   N   VDA +    P+    Y  W +
Sbjct: 310 SRLTNRSEQNPPTITENEDQVDAQHSTASPRNTSNYSPWER 350


>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
          Length = 286

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -1

Query: 635 LKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 513
           L++ +   P +    G  +++I F GC GA++E+   + +Y
Sbjct: 65  LQSFMLYMPTLLFFTGFSLYLIVFFGCVGALKENTLFLASY 105


>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
          Length = 919

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = -1

Query: 611 PWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTY 513
           P + I  G ++ ++  +GC   I+E+  ++V+Y
Sbjct: 60  PGLMIAAGCLVIIVCVVGCVAVIKENRFILVSY 92


>SB_47002| Best HMM Match : RVT_1 (HMM E-Value=1.5e-16)
          Length = 894

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 333 MLR*HWRY-QLRPVHVARVLLRQEEHPPTFAGNNCT 229
           +LR HWR  QL+ +H  RVL      PP  AG++ T
Sbjct: 843 LLRIHWRQRQLQHMHRRRVLSMTVCRPPAVAGSSKT 878


>SB_46125| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1564

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 290 LPESCCVKKSILLPSPATTARSTPRI 213
           L  SC V + +  PSPA T RS PR+
Sbjct: 389 LVASCKVPEKVNAPSPAQTLRSLPRV 414


>SB_34927| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 90

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 590 GAVMFVIAFLGCCGAIRESHCMVVTYATS 504
           G  +FV+ F  CCG      C+V+ Y +S
Sbjct: 10  GGRIFVLTFCCCCGLFLLLFCLVILYLSS 38


>SB_9216| Best HMM Match : Connexin (HMM E-Value=1.5)
          Length = 334

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 263 SILLPSPATTARSTPRIPAAVPRSASSTRNG 171
           S+  P+   T R   R PA+ PR++ S RNG
Sbjct: 303 SLRQPASRATPRQPARQPASQPRNSHSARNG 333


>SB_35792| Best HMM Match : His_leader (HMM E-Value=3.5)
          Length = 168

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 543 YRSTASQERDHEHYSPDD 596
           YR T SQ R H H++PD+
Sbjct: 104 YRRTRSQLRPHHHFAPDE 121


>SB_24041| Best HMM Match : rve (HMM E-Value=9.7e-08)
          Length = 399

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 543 YRSTASQERDHEHYSPDD 596
           YR T SQ R H H++PD+
Sbjct: 336 YRRTRSQLRPHHHFAPDE 353


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,867,735
Number of Sequences: 59808
Number of extensions: 486760
Number of successful extensions: 1545
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1542
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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