Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0091.Seq
         (845 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    26   1.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.1  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    24   6.7  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    24   6.7  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    24   6.7  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   8.8  

>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 23/85 (27%), Positives = 32/85 (37%)
 Frame = -3

Query: 366 LLTEVTASANGPTIFRDSINMVCYGMIACMKLLM*LKPPQTSIPCC*REKLPYCTCHTAL 187
           +LT + A   G    R +   VC  ++  +  L  LK P T +  C      Y  C  A 
Sbjct: 17  MLTAIVAQGTGRKTVRKNAVFVCDCVVTIIVFLSRLKGPDTIV--CYDPNEVYDDCGPAC 74

Query: 186 HAKNNPT*RRVDKI*RRFPILNPNC 112
             +     R+ D   RR    NP C
Sbjct: 75  GDRTCTNQRKNDSACRR--SCNPGC 97


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -1

Query: 110 EQVEKERLEREQWEKE 63
           EQ EKE+ E+EQ EKE
Sbjct: 481 EQREKEQREKEQREKE 496



 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -1

Query: 110 EQVEKERLEREQWEKE 63
           +Q EKE+ EREQ EKE
Sbjct: 501 QQREKEQREREQREKE 516



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 110 EQVEKERLEREQWEKE 63
           EQ EKE  ER+Q EKE
Sbjct: 491 EQREKEERERQQREKE 506


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -1

Query: 164 KEEWT----KYEEDSLYLTPIVEQVEKERLERE 78
           KE+W     KY+ ++LY+    E+ +KE ++ E
Sbjct: 95  KEQWDALQKKYDPENLYVEKYREEAKKEGIKLE 127


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -1

Query: 164 KEEWT----KYEEDSLYLTPIVEQVEKERLERE 78
           KE+W     KY+ ++LY+    E+ +KE ++ E
Sbjct: 95  KEQWDALQKKYDPENLYVEKYREEAKKEGIKLE 127


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 821 PNPXPGALGECXSGPTI 771
           P   P  LGEC + PT+
Sbjct: 30  PRSPPSDLGECSASPTV 46


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
 Frame = -1

Query: 752 VLKSGLKMLP*IFRAWNNRI*SRFYFVGFQNSE------VMINRDNWGHSYCDVRGEILG 591
           +LK  L  L    R WN  I      +GF +SE      V   RD W      V   ++ 
Sbjct: 572 LLKKSLYGLKQAGRVWNQTITEVLRSLGFHSSEADPCLFVKNKRDRWSFILLYVDDMLVA 631

Query: 590 SSQD---EHQRKHLPKVFS-SIKNES*RFEGVRYRPSSNRKYVI 471
            S+D   E     L + F  +   +   + G+R     N +Y++
Sbjct: 632 CSEDREYEDIENTLKRHFKITTLGDVRNYLGIRIERGQNGEYLL 675


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,635
Number of Sequences: 2352
Number of extensions: 15258
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)