Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0090.Seq
(861 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 83 7e-15
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 83 7e-15
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 80 6e-14
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 77 8e-13
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 55 3e-06
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 48 3e-04
UniRef50_UPI0000DA1E5B Cluster: PREDICTED: hypothetical protein;... 45 0.002
UniRef50_Q8TGM6 Cluster: Protein TAR1; n=1; Saccharomyces cerevi... 38 0.33
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 38 0.43
UniRef50_A3NJM5 Cluster: Thymidylate kinase; n=1; Burkholderia p... 37 0.57
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.57
UniRef50_Q6CQE5 Cluster: Protein TAR1; n=2; Kluyveromyces lactis... 37 0.57
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.3
UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2; ... 35 2.3
UniRef50_A4QMB9 Cluster: ORF124; n=2; Spermatophyta|Rep: ORF124 ... 34 4.0
UniRef50_Q223Q7 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 34 5.3
UniRef50_Q09AC4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 83.4 bits (197), Expect = 7e-15
Identities = 41/55 (74%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = +3
Query: 405 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE---PAPIALPNSCAAEWRMA 560
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE P S EWR A
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 83.4 bits (197), Expect = 7e-15
Identities = 41/55 (74%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = +3
Query: 405 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE---PAPIALPNSCAAEWRMA 560
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE P S EWR A
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 81.4 bits (192), Expect = 3e-14
Identities = 40/55 (72%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Frame = +3
Query: 405 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE---PAPIALPNSCAAEWRMA 560
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE P EWR A
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 80.2 bits (189), Expect = 6e-14
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 405 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE 509
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEE 56
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +1
Query: 403 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKSPHRSPFPTVAQLNGEWQI 564
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++ R+ P+ + +W++
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEA-RTDRPSQQLRSLKWRM 57
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 54.8 bits (126), Expect = 3e-06
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 405 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE 506
L +L RRDWENP +TQ +RL AHPPF SWR+ E
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVE 48
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = +3
Query: 405 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE-----EPAPIALPNSCAAEWRMA 560
LA +L R DW+NP +T +NRL +H P WR+++ EP+ L S EW+ +
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVL--SLDGEWQFS 72
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/41 (58%), Positives = 27/41 (65%)
Frame = +3
Query: 414 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEPAPIALPNS 536
VL R DW N +T LNRL AHP FASWR+ E A LP+S
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRD-ELAARDNLPSS 56
>UniRef50_UPI0000DA1E5B Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 219
Score = 45.2 bits (102), Expect = 0.002
Identities = 31/69 (44%), Positives = 33/69 (47%)
Frame = +2
Query: 113 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID*NNGIQSGLYSCSLAATKE 292
P ATGL PSTG RRTW LP T P GIQ CSL T+
Sbjct: 151 PGSATGLTPSTGWAS-IRRTWAPNQRRLGVGLPYATFPAPRHAAGIQRWALPCSLTITEG 209
Query: 293 ILVSFFSSA 319
ILV+F SSA
Sbjct: 210 ILVTFSSSA 218
>UniRef50_Q8TGM6 Cluster: Protein TAR1; n=1; Saccharomyces
cerevisiae|Rep: Protein TAR1 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 124
Score = 37.9 bits (84), Expect = 0.33
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 5/36 (13%)
Frame = +3
Query: 15 VSRSYLALDGVYHPLRAV-----TLKQPDSKERPSR 107
VSR YLALDG+YHPLRA TL++ +K R R
Sbjct: 50 VSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNRTPR 85
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 37.5 bits (83), Expect = 0.43
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 414 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEE 509
++ RRDWENP Q+N++ AH P ++ E+
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIED 38
>UniRef50_A3NJM5 Cluster: Thymidylate kinase; n=1; Burkholderia
pseudomallei 668|Rep: Thymidylate kinase - Burkholderia
pseudomallei (strain 668)
Length = 214
Score = 37.1 bits (82), Expect = 0.57
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +2
Query: 38 RWSLPPA*GCHSQATRL*GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRK 199
RW + P S RL G PRP APSTG++P RR VA R+
Sbjct: 32 RWRMRPPAAAGSARRRLRGPRCRPRPFAIGHRAPSTGRQPSPRRDAFRPVANRR 85
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.57
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 349 PPGGARYPIRPIVSRIT 399
P GGARYPIRPIVSRIT
Sbjct: 259 PRGGARYPIRPIVSRIT 275
>UniRef50_Q6CQE5 Cluster: Protein TAR1; n=2; Kluyveromyces
lactis|Rep: Protein TAR1 - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 109
Score = 37.1 bits (82), Expect = 0.57
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 15 VSRSYLALDGVYHPLRA 65
VSR YLALDG+YHPLRA
Sbjct: 35 VSRQYLALDGIYHPLRA 51
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 414 VLQRRDWENPGVTQLNRLAAHPP 482
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A1CUU5 Cluster: Putative uncharacterized protein; n=2;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 172
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 350 GSPAEFKHISKRRKRN*PGFP 288
G PAE KHI+KRRKRN G P
Sbjct: 151 GIPAELKHINKRRKRNQQGLP 171
>UniRef50_A4QMB9 Cluster: ORF124; n=2; Spermatophyta|Rep: ORF124 -
Pinus koraiensis (Korean pine)
Length = 124
Score = 34.3 bits (75), Expect = 4.0
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 222 LPLSIKTTGFS-LGYIPVRSPLLRKSWLVSFPPLTNMLKF 338
L L TT FS +P RSPLLR+S L+S P T M +F
Sbjct: 34 LILGSPTTPFSRFRLLPFRSPLLRESLLLSIPLATKMFQF 73
>UniRef50_Q223Q7 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 173
Score = 34.3 bits (75), Expect = 4.0
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = -2
Query: 344 PAEFKHISKRRKRN*PGFP**RRANR 267
PAE KHISKRRKRN G P R NR
Sbjct: 49 PAELKHISKRRKRNQLGQPQQWRMNR 74
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 33.9 bits (74), Expect = 5.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 426 RDWENPGVTQLNRLAAHPPFASWRNSEE 509
R+WEN +TQ+NR H P+ ++ + E+
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQ 30
>UniRef50_Q09AC4 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 733
Score = 33.1 bits (72), Expect = 9.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 113 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSP 226
P+ L P T RP SRR T + + K+ P+ T+P
Sbjct: 47 PASCCSLPPPTATRPSSRRRITSISSVNKKAFPSATAP 84
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 836,526,981
Number of Sequences: 1657284
Number of extensions: 17676608
Number of successful extensions: 47928
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 45751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47903
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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