Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0090.Seq
         (861 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.2  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   3.9  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   5.2  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   6.8  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   6.8  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   6.8  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    23   9.0  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +2

Query: 128 GLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID*NNGIQSGLYSCSLAATKEILVSF 307
           G  P      ++ R W GV+   KR  P   S ++D       GL + +LAAT  +  + 
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD-------GLNTEALAATIFMYFAA 458

Query: 308 FSSA 319
            S+A
Sbjct: 459 LSTA 462


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +3

Query: 438 NPGVTQLNRLAAHPPFASWRNSEEPAPIALPNSCAA 545
           +PG     +L+ HPP AS R+S    P +  +  AA
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSSAVITPPSTHHQAAA 870


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 104 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 211
           +P  S++ G++      P +   WTG V  RK+  P
Sbjct: 241 NPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKP 276


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 379 GELGTGPPREDHPPNLSILVSGGKETNQ 296
           G L   PP    PP     VSGG++ NQ
Sbjct: 232 GALPETPPPAYSPPEEGNTVSGGQDGNQ 259


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 113 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 235
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 113 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 235
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 113 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 235
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 81  PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 468 AAHPPFASWRNSEEPAPIALPNSCAAE 548
           AAHP F   +N+++  P   P  C AE
Sbjct: 59  AAHP-FKPPQNTDDKGPRGHPGECIAE 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,589
Number of Sequences: 2352
Number of extensions: 17950
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)