Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0089.Seq
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.2  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    23   6.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -2

Query: 287 RSSQXFHXPLCSAPALFLXSRSDPVGAEPSNRSVHDSWCSM 165
           RS      P C  P   L  R   V   P ++S   S CS+
Sbjct: 94  RSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSAASSSCSL 134


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 373 FGKTAAGTPIVISLMSAAESH 435
           F  +   TP+ +SL+S A SH
Sbjct: 841 FSPSGGTTPVPVSLLSPASSH 861


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +1

Query: 316 NVFMWYSIYXR-RVFCMIWFFGKTAAGT 396
           + F +Y I      FC +WF   TA GT
Sbjct: 232 HTFAYYHIIAMLNGFCSLWFVNCTAFGT 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,565
Number of Sequences: 2352
Number of extensions: 10553
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)