Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0084.Seq
         (822 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         27   0.70 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   1.2  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   6.5  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   6.5  

>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +2

Query: 512 VCKVSSDAHKQVMLYAXQVEWNTNASLYFWIIVTVLGGCRH 634
           +C +S D+     +   ++ W  +     W + T  GGCR+
Sbjct: 66  ICNLSPDSLSDDEMTRGKISWEMSMFEGEWAVGTTAGGCRN 106


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 494 NCCNAYVCKVSSDAHKQVMLYAXQVEWNTN 583
           +CC+ Y C    +  KQ   Y  Q  W++N
Sbjct: 745 HCCDFYACDCKMECPKQCTCYHDQ-SWSSN 773


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = +1

Query: 463 QNCALSKRQRKLL*CVCMQSLI*RTQTGDVVREXGRMEYQCESIFLDH 606
           QNCA+ ++  KLL  +     + + +  +  R   ++E Q E +   H
Sbjct: 130 QNCAMKEQNAKLLEQITGMCQLLQEEKEEAKRREEKLEAQMEKLAAAH 177


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 399 EAIFNGIDEFNVDNESLFPIIAELRVIKTPEEIA 500
           +A+  G  EF+   + L P +AEL  +K P  +A
Sbjct: 120 DAMTLGNHEFDHSPKGLAPYLAELEKMKIPTVVA 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,960
Number of Sequences: 2352
Number of extensions: 19195
Number of successful extensions: 55
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)