Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0078.Seq
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 141 1e-34
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 121 2e-28
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 113 2e-26
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 105 1e-23
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 99 9e-22
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 87 2e-18
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 75 1e-14
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 3e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.017
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 27 2.6
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 3.4
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 3.4
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 4.5
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 26 5.9
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 5.9
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 26 5.9
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 7.8
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 7.8
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 7.8
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 7.8
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 141 bits (341), Expect = 1e-34
Identities = 67/103 (65%), Positives = 75/103 (72%)
Frame = +3
Query: 195 GLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 374
G F PQF + NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 375 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKT 503
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGAT 150
Score = 102 bits (244), Expect = 7e-23
Identities = 46/68 (67%), Positives = 50/68 (73%)
Frame = +1
Query: 67 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 246
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 247 FTNITALG 270
FT G
Sbjct: 65 FTRGNGTG 72
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 121 bits (291), Expect = 2e-28
Identities = 56/94 (59%), Positives = 68/94 (72%)
Frame = +3
Query: 192 QGLHFPSCHPQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 371
+G F P F + + +GTGGKSIYG++F DENF L H PG+LSMANAG D+N
Sbjct: 72 EGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSN 131
Query: 372 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 473
GSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 132 GSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 97.1 bits (231), Expect = 3e-21
Identities = 45/73 (61%), Positives = 51/73 (69%)
Frame = +1
Query: 34 ANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 213
AN G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHR
Sbjct: 19 ANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHR 78
Query: 214 VIPNFMLQGGDFT 252
VIPNFM+QGGD T
Sbjct: 79 VIPNFMIQGGDIT 91
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 113 bits (273), Expect = 2e-26
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
NGTGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG
Sbjct: 74 NGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFG 133
Query: 438 NVVEGMEVVKQIETFGSQS 494
V++G V+ IE +++
Sbjct: 134 KVIQGKSTVRTIENLETKN 152
Score = 66.9 bits (156), Expect = 3e-12
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Frame = +1
Query: 67 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 234
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 235 QGGDFTNITALG 270
QGGDFT G
Sbjct: 66 QGGDFTRGNGTG 77
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 105 bits (251), Expect = 1e-23
Identities = 47/75 (62%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +3
Query: 258 NGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 434
+GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVF
Sbjct: 78 DGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVF 137
Query: 435 GNVVEGMEVVKQIET 479
G V+EG ++VK+IE+
Sbjct: 138 GEVIEGYDIVKEIES 152
Score = 80.2 bits (189), Expect = 3e-16
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Frame = +1
Query: 58 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 219
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 220 PNFMLQGGDFTNITALGESPSTAISLKTRISP 315
FM+QGGDF + G+ +A +R P
Sbjct: 65 QGFMIQGGDFVS----GDGTGSATIFNSRTFP 92
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 98.7 bits (235), Expect = 9e-22
Identities = 47/87 (54%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +3
Query: 261 GTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
G GG SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG
Sbjct: 61 GRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFG 120
Query: 438 NVVEGMEVVKQIETFGSQSGKTSKESL 518
VV G+ V K++ + S E L
Sbjct: 121 RVVSGLSVCKRMGLIRTDSSDRPIEPL 147
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 97 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITALGES 276
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G S
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGTS 66
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 87.4 bits (207), Expect = 2e-18
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = +3
Query: 258 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 434
+GTGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F
Sbjct: 513 DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIF 572
Query: 435 GNVVEGMEVVKQIE 476
G++VV +IE
Sbjct: 573 ARAYAGLDVVHRIE 586
Score = 46.0 bits (104), Expect = 7e-06
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITALGES 276
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD GES
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLGDGTGGES 519
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 75.4 bits (177), Expect = 1e-14
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 GTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
G GG+SI+G F+DE LKH G++SMAN G +TNGSQFFI LD +H +FG
Sbjct: 335 GRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFG 394
Query: 438 NVVEGMEVVKQIETFGSQSGKTSK 509
VV G+ V+ +E + S K
Sbjct: 395 RVVGGLNVLDALEKVPTNSNDHPK 418
Score = 44.0 bits (99), Expect = 3e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITALGES 276
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGDPSGTGRGGQS 340
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 54.0 bits (124), Expect = 3e-08
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +1
Query: 100 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNITALGES 276
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T GES
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGGES 77
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 GTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 437
G GG+SIYG F E L+ G++ MA + N SQFFIT T +G+ +FG
Sbjct: 72 GMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFG 131
Query: 438 NVV 446
VV
Sbjct: 132 RVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 34.7 bits (76), Expect = 0.017
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +1
Query: 88 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 246
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGD 55
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 214 VIPNFMLQGGDFTNITALGESPSTAISLKTRISPLSTLDLASSP 345
V+ + G DF N L SP T+++L+ R S LS+ S+P
Sbjct: 76 VMETYYPHGQDF-NDALLVASPDTSVALRYRSSQLSSSTFESTP 118
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 76 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 171
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 499 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 413
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 4.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 371 WFPVLHHHC 397
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 103 KIVIELRSDVTPKTC-ENFRA---LCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNIT 261
++++ L SD+ PK C NF+A L FG + + F +I + G F ++
Sbjct: 1135 QLMLRLHSDIYPKICISNFKALRELSFSISEFGKENATFTLLIKLVFINWGRFCEVS 1191
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 466 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 317
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 5.9
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
Frame = -3
Query: 455 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 294
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 293 LIAVDGLSPS----AVMLVKSPPCSMKLG 219
LSPS + K C KLG
Sbjct: 287 KFLHHSLSPSIHSTLSSISKMESCLSKLG 315
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 246 LHQHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 389
L ++ T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 12 LEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = +3
Query: 219 PQFHAARRGLHQHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGAD 365
P ++ LH+H+ S + + EN L H V + N A+
Sbjct: 279 PNYYNEHNELHEHHNPQTPSSPESAYSPENLQLNHEAQNVEYLGNNAAE 327
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -1
Query: 484 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 305
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 304 SSSNL 290
SSS++
Sbjct: 222 SSSSI 226
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -2
Query: 252 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 73
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 72 EEYS 61
E++S
Sbjct: 937 EDHS 940
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,656,303
Number of Sequences: 5004
Number of extensions: 79775
Number of successful extensions: 260
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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