Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0077.Seq
         (481 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    25   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   7.2  
AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein prot...    23   7.2  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   7.2  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 163 LALRTGACRVWTGSGCXRCRVWSM 234
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -3

Query: 179 PVLRANPYSEVTDPICRLPLPTLFYR 102
           P L     S +  P CRLP P L  R
Sbjct: 89  PELVTRSLSNLELPSCRLPCPNLIPR 114


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +3

Query: 141 IRNFGIRIGSEDRGVSGLDGKRMXPVPG 224
           I N  I      R VSGLD  R  P PG
Sbjct: 10  IGNLFIEPNRYRRIVSGLDSTRGSPAPG 37


>AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein
           protein.
          Length = 90

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 430 ESCRSRTKRNRHDLTARKIRGRPENAGPDPVR 335
           +S  SR ++ RH+LT    R     A PD  R
Sbjct: 54  DSLLSRLEQMRHNLTGCSERETTNPAPPDDTR 85


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 184 TPRSSEPILIPKLRIQFADFPYL 116
           TP+    +++PKL+ + A  P+L
Sbjct: 14  TPQDKRTMVLPKLKDETAVMPFL 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,317
Number of Sequences: 2352
Number of extensions: 9411
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)