Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0075.Seq
         (799 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74043-10|CAA98542.2|  653|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z93396-1|CAB07709.1|  875|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ...    28   8.9  
AC006638-7|AAK85485.2|  491|Caenorhabditis elegans Hypothetical ...    28   8.9  

>Z74043-10|CAA98542.2|  653|Caenorhabditis elegans Hypothetical
           protein T19B10.3 protein.
          Length = 653

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 487 ASKEIFSRVYRNWFVFIYPRIVKTLMKEG 401
           +S  +F+R   NWF  + PR+   L K G
Sbjct: 160 SSDRVFTREVENWFEILLPRVKPLLRKNG 188


>Z93396-1|CAB07709.1|  875|Caenorhabditis elegans Hypothetical
           protein ZC15.1 protein.
          Length = 875

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -2

Query: 525 RETQWPCIY-PLDPRAKKSLAAYI 457
           RE  WP  Y P DP AK  L AY+
Sbjct: 55  REGNWPLEYVPADPLAKGGLRAYV 78


>Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical
           protein C31A11.10 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +1

Query: 124 VTTNNNSFF----LFRLFIYLHFFPLFTSIYYSYGAFFLFFF 237
           +TT +N FF     FRLFI+ HFF    +    + AF +  F
Sbjct: 177 ITTFSNVFFSAVVTFRLFIWNHFFSTQATRIALFDAFIVIVF 218


>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
            protein H20J04.2 protein.
          Length = 1427

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 582  PXFAESTTGSETRPTEKIRRETQWPCIYPLDPR 484
            P   E  T  ET   E +R+E  WP + P+D +
Sbjct: 1320 PNIKEKMTLIETLLKEAMRQECSWPFLQPVDSK 1352


>AC006638-7|AAK85485.2|  491|Caenorhabditis elegans Hypothetical
           protein F41G4.5 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -2

Query: 525 RETQWPCIY-PLDPRAKKSLAAYI 457
           RE  WP  Y P DP AK  L AY+
Sbjct: 59  REGNWPMEYVPADPLAKGGLRAYV 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,180,390
Number of Sequences: 27780
Number of extensions: 263176
Number of successful extensions: 639
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)