Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0075.Seq
(799 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 25 1.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 1.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 25 1.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 25 1.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 25 1.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 25 1.1
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 3.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 7.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.6
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 LNDSSSGK*PKKIL-SNNTVKTHYSPFLH*SFHYSR 433
+N SG KK S+N++++ F H S HYSR
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 LNDSSSGK*PKKIL-SNNTVKTHYSPFLH*SFHYSR 433
+N SG KK S+N++++ F H S HYSR
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 LNDSSSGK*PKKIL-SNNTVKTHYSPFLH*SFHYSR 433
+N SG KK S+N++++ F H S HYSR
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 LNDSSSGK*PKKIL-SNNTVKTHYSPFLH*SFHYSR 433
+N SG KK S+N++++ F H S HYSR
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSR 233
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 LNDSSSGK*PKKIL-SNNTVKTHYSPFLH*SFHYSR 433
+N SG KK S+N++++ F H S HYSR
Sbjct: 187 VNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSR 222
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 LNDSSSGK*PKKIL-SNNTVKTHYSPFLH*SFHYSR 433
+N SG KK S+N++++ F H S HYSR
Sbjct: 198 VNIKKSGNESKKYATSSNSLRSRTHGFQHTSSHYSR 233
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 58 ILKLWCFFVFFCNSRSC*QLSIVTTNNNSFFLFRLFIYLHFFPLFTSIYY 207
++ +W FV SC + TN F+ +F + + P+ IYY
Sbjct: 181 VMGVWGRFVPEGFLTSCSFDYLTDTNEIRIFVATIFTFSYCIPMILIIYY 230
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 573 AESTTGSETRPTEKIRRETQ 514
A TTG+ T PT ++R+ Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 221 FFCFFFVTPARVTAVNRYHKYRFTDADKLPMTSWAEL 331
F C F+ + V + Y +AD M+ W ++
Sbjct: 298 FNCIMFMVASSVVSTILILNYHHRNADTHEMSEWVKV 334
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.6
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 329 LNDSSSGK*PKKIL-SNNTVKTHYSPFLH*SFHYSR 433
+N SG KK S+N++++ F H S YSR
Sbjct: 198 VNIEKSGNESKKYATSSNSLRSRTHDFQHTSSRYSR 233
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,687
Number of Sequences: 438
Number of extensions: 3312
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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