Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0074.Seq
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.1  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.5  
AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione S-tran...    23   9.5  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 309 SHCPYLLSSETTSKEGSRPQITHSRHGEVVT 217
           S+CP++L SET      R     SR G V T
Sbjct: 904 SNCPHILPSETEIDNIQRVIELKSREGAVST 934


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 47  CAPRCRCTH 21
           C P C CTH
Sbjct: 604 CGPNCMCTH 612


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 8   SITADACTDSAAHKCNYELFNR 73
           +I +D   DS+   CN E FN+
Sbjct: 639 TIASDVAFDSSDFPCNSEEFNK 660


>AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione
           S-transferase E6 protein.
          Length = 227

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 329 FEWINEIPTVPIYYLAKPHPRKAAGRKLPTPGT 231
           F W++ +  +P Y        KAAG  + T G+
Sbjct: 185 FAWMDRLSKLPYYGEVMGRGLKAAGELMQTLGS 217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,548
Number of Sequences: 2352
Number of extensions: 10491
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)