Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0074.Seq
         (583 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.                  90   5e-18
BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16 p...    90   5e-18
BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16 p...    90   5e-18
AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16 p...    90   5e-18
BC054882-1|AAH54882.1|  204|Homo sapiens Unknown (protein for IM...    33   0.73 
AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.        33   0.73 
AL391827-2|CAI16231.1|  198|Homo sapiens novel protein protein.        33   0.73 
D87002-3|BAA20000.1|  428|Homo sapiens POM121-like 1 protein.          31   2.2  
BC103891-1|AAI03892.2|  428|Homo sapiens POM121L1 protein protein.     31   2.2  

>M60854-1|AAA60583.1|  146|Homo sapiens RPS16 protein.
          Length = 146

 Score = 90.2 bits (214), Expect = 5e-18
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 327 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSXR 461
           EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS R
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146


>BC007977-1|AAH07977.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score = 90.2 bits (214), Expect = 5e-18
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 327 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSXR 461
           EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS R
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146


>BC004324-1|AAH04324.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score = 90.2 bits (214), Expect = 5e-18
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 327 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSXR 461
           EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS R
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146


>AB061841-1|BAB79479.1|  146|Homo sapiens ribosomal protein S16
           protein.
          Length = 146

 Score = 90.2 bits (214), Expect = 5e-18
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = +3

Query: 327 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSXR 461
           EASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKS R
Sbjct: 102 EASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146


>BC054882-1|AAH54882.1|  204|Homo sapiens Unknown (protein for
           IMAGE:6451327) protein.
          Length = 204

 Score = 33.1 bits (72), Expect = 0.73
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 306 GNLVNPFEASKKEIKD-ILVQYDRSLLVADPRRCEPK 413
           G L+    ASKK +K+ +++ YD   +  DP +C P+
Sbjct: 8   GGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44


>AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.
          Length = 689

 Score = 33.1 bits (72), Expect = 0.73
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 306 GNLVNPFEASKKEIKD-ILVQYDRSLLVADPRRCEPK 413
           G L+    ASKK +K+ +++ YD   +  DP +C P+
Sbjct: 8   GGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44


>AL391827-2|CAI16231.1|  198|Homo sapiens novel protein protein.
          Length = 198

 Score = 33.1 bits (72), Expect = 0.73
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 306 GNLVNPFEASKKEIKD-ILVQYDRSLLVADPRRCEPK 413
           G L+    ASKK +K+ +++ YD   +  DP +C P+
Sbjct: 8   GGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44


>D87002-3|BAA20000.1|  428|Homo sapiens POM121-like 1 protein.
          Length = 428

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 23/63 (36%), Positives = 27/63 (42%)
 Frame = -2

Query: 420 RTSWARSDAGQPPANSYRIVLGCL*FPSLRLRMD*RDSHCPYLLSSETTSKEGSRPQITH 241
           +TSW  S   +   +S     G L  P L+ R     SHC   LSS  T  E  RPQ   
Sbjct: 109 QTSWTSSCTNRNAISSSYSSTGGL--PGLKRRRGPASSHCQLTLSSSKTVSE-DRPQAVS 165

Query: 240 SRH 232
           S H
Sbjct: 166 SGH 168


>BC103891-1|AAI03892.2|  428|Homo sapiens POM121L1 protein protein.
          Length = 428

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 23/63 (36%), Positives = 27/63 (42%)
 Frame = -2

Query: 420 RTSWARSDAGQPPANSYRIVLGCL*FPSLRLRMD*RDSHCPYLLSSETTSKEGSRPQITH 241
           +TSW  S   +   +S     G L  P L+ R     SHC   LSS  T  E  RPQ   
Sbjct: 109 QTSWTSSCTNRNAISSSYSSTGGL--PGLKRRRGPASSHCQLTLSSSKTVSE-DRPQAVS 165

Query: 240 SRH 232
           S H
Sbjct: 166 SGH 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,371,547
Number of Sequences: 237096
Number of extensions: 1564184
Number of successful extensions: 2856
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2856
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)