Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0074.Seq
         (583 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...    92   4e-19
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...    92   4e-19
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    29   4.6  
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    29   4.6  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    28   8.0  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +3

Query: 327 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSXR 461
           EASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKS R
Sbjct: 104 EASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = +3

Query: 327 EASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSXR 461
           EASKKEIKDILVQYDR+LLV DPRRCEPKKFGGPGARARYQKS R
Sbjct: 104 EASKKEIKDILVQYDRTLLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 378 LLVADPRRCEPKKFGGPGARARY 446
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +3

Query: 378 LLVADPRRCEPKKFGGPGARARY 446
           LL  D RR E KKFG  GAR +Y
Sbjct: 368 LLTRDYRRRERKKFGQEGARRKY 390


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 363 QYDRSLLVADPRRCEPKKFGGPGARARYQKSXR*AFKK 476
           ++D+ LLVA P  C PKK   P    + Q+  +   KK
Sbjct: 233 RFDQRLLVAIPPNCPPKKQNKPQQNKQQQQQNKQQQKK 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,373,502
Number of Sequences: 53049
Number of extensions: 477955
Number of successful extensions: 1148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)