Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0073.Seq
         (851 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04239-1|AAC46482.1| 1057|Drosophila melanogaster tolloid protei...    30   4.6  
M76976-1|AAA28491.1| 1057|Drosophila melanogaster dorsal-ventral...    30   4.6  
BT010008-1|AAQ22477.1|  808|Drosophila melanogaster RE25412p pro...    30   4.6  
AE014297-3619|AAF56329.2| 1067|Drosophila melanogaster CG6868-PA...    30   4.6  

>U04239-1|AAC46482.1| 1057|Drosophila melanogaster tolloid protein
           protein.
          Length = 1057

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 467 WNKSPLLKNVDSNVKGE---KPSIRAMAHYVNHHPNQVFWGXGA 589
           W+KSPL++ +  NV GE     + R + +YVN +  + + G  A
Sbjct: 419 WHKSPLVRRICGNVSGEVITTQTSRMLLNYVNRNAAKGYRGFKA 462


>M76976-1|AAA28491.1| 1057|Drosophila melanogaster dorsal-ventral
           patterning protein protein.
          Length = 1057

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 467 WNKSPLLKNVDSNVKGE---KPSIRAMAHYVNHHPNQVFWGXGA 589
           W+KSPL++ +  NV GE     + R + +YVN +  + + G  A
Sbjct: 419 WHKSPLVRRICGNVSGEVITTQTSRMLLNYVNRNAAKGYRGFKA 462


>BT010008-1|AAQ22477.1|  808|Drosophila melanogaster RE25412p
           protein.
          Length = 808

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 467 WNKSPLLKNVDSNVKGE---KPSIRAMAHYVNHHPNQVFWGXGA 589
           W+KSPL++ +  NV GE     + R + +YVN +  + + G  A
Sbjct: 170 WHKSPLVRRICGNVSGEVITTQTSRMLLNYVNRNAAKGYRGFKA 213


>AE014297-3619|AAF56329.2| 1067|Drosophila melanogaster CG6868-PA
           protein.
          Length = 1067

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 467 WNKSPLLKNVDSNVKGE---KPSIRAMAHYVNHHPNQVFWGXGA 589
           W+KSPL++ +  NV GE     + R + +YVN +  + + G  A
Sbjct: 429 WHKSPLVRRICGNVSGEVITTQTSRMLLNYVNRNAAKGYRGFKA 472


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,816,700
Number of Sequences: 53049
Number of extensions: 689093
Number of successful extensions: 1334
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)