Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0062.Seq
(512 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 150 8e-37
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 1e-25
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 66 2e-11
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 60 8e-10
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 58 6e-09
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 54 5e-08
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 54 9e-08
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 53 2e-07
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 53 2e-07
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 52 3e-07
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 46 2e-05
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 42 2e-04
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 38 0.006
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.008
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 35 0.045
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0) 35 0.045
SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 33 0.14
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 33 0.14
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 33 0.14
SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 27 6.9
SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_39674| Best HMM Match : Recep_L_domain (HMM E-Value=7.1) 27 9.1
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 150 bits (363), Expect = 8e-37
Identities = 61/79 (77%), Positives = 69/79 (87%)
Frame = +1
Query: 22 EEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
EEPVEGF V++ E N FEW+VAIFGPP TLY GGYFKAHM FP DYPYSPP+ RFLTK+
Sbjct: 1138 EEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKM 1197
Query: 202 WHPNVYENGDLCISILHPP 258
WHPN+YE+GD+CISILHPP
Sbjct: 1198 WHPNIYESGDVCISILHPP 1216
Score = 132 bits (320), Expect = 1e-31
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = +3
Query: 252 PPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKD 431
PPVDDPQSGELP ERWNPTQ+VRT+LLSVISLLNEPNTFSPANVDASVM+R+WR++KGKD
Sbjct: 1215 PPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRETKGKD 1274
Query: 432 KEYENII 452
EYE II
Sbjct: 1275 SEYEKII 1281
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 112 bits (270), Expect = 1e-25
Identities = 41/80 (51%), Positives = 62/80 (77%)
Frame = +1
Query: 19 REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK 198
+++PVEGF L +++L++WE+ + GPP T Y+ GYFKA M FP +YP PP++ F++
Sbjct: 345 QKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISD 404
Query: 199 VWHPNVYENGDLCISILHPP 258
+WHPNV++NG++CISILH P
Sbjct: 405 IWHPNVHKNGEVCISILHEP 424
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +3
Query: 255 PVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASV 395
P +D E ERW P +V T++LSVIS+L EPN SPANVDA+V
Sbjct: 424 PGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDESPANVDAAV 470
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +1
Query: 19 REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK 198
R+ + FR + E N+ W+ I P Y G F+ + FP +YP+ PP I F TK
Sbjct: 6 RKSGTKTFRDVKVDESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTK 64
Query: 199 VWHPNVYENGDLCISILHP 255
++HPN+ E G +C+ I+ P
Sbjct: 65 IYHPNIDEKGQVCLPIISP 83
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
EDNLFEW + GPPDT + GG + + PP+YP PPSI LT + + L +
Sbjct: 35 EDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTPNGRFEIGKKICLSM 94
Query: 241 SILHP 255
S HP
Sbjct: 95 SAHHP 99
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLL 350
E W P+ S+RTVL+++I +
Sbjct: 100 ETWQPSWSIRTVLMAIIGFM 119
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 60.5 bits (140), Expect = 8e-10
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW 204
DNLFEW + GPPDT + GG + + PP+YP PPSI LT VW
Sbjct: 1 DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT-VW 46
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK-----VWHPNVYEN 225
+D++ + I GP DT Y+GG+F ++ PPDYP PP ++ +T ++PN+Y N
Sbjct: 7 KDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRN 66
Query: 226 GDLCISIL 249
G +C+SI+
Sbjct: 67 GKVCLSII 74
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 57.6 bits (133), Expect = 6e-09
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 91 IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
+ G T Y G FK ++ P YP+ PP +RF+T ++HPN+ +G +C+ L P
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP 57
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 285 PCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDAS 392
P W P ++ +VL +++ L+ EPN P + S
Sbjct: 58 PKGMWKPALNISSVLSTILILMAEPNPDDPLMAEIS 93
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV-YENGDLC 237
EDN+ E+E+ I P D Y+GG FK +K DYP +PP R + ++HPN+ ++G +C
Sbjct: 33 EDNMEEFELQIT-PTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVC 90
Query: 238 ISIL 249
+S+L
Sbjct: 91 LSLL 94
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 53.6 bits (123), Expect = 9e-08
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 183
D L+EW I GPP ++Y+GG F + FP DYP+ PP +
Sbjct: 49 DKLYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPP 177
D+L+EW I GPP ++Y+GG F + FP DYP+ PP
Sbjct: 162 DDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 199
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 52.8 bits (121), Expect = 2e-07
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPP 177
D+L+EW I GPP ++Y+GG F + FP DYP+ PP
Sbjct: 122 DDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 159
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 234 LHIDSPPPVDDPQSG---ELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
+H S P P+ ++ + W+P ++ VLLS+ SLL + N P + +Y
Sbjct: 148 IHFPSDYPFKPPKGMVCLDILKDSWSPALTISKVLLSICSLLTDCNPADPLVGSIAALY 206
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
EDN+ E+E+ I P D Y+GG FK ++ DYP PSI TK++HPN+ +C+
Sbjct: 33 EDNMEEFELQIT-PTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCM 90
Query: 241 SIL 249
S+L
Sbjct: 91 SLL 93
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 79 WEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV---WHPNVYENGDLCIS 243
+ V I GP T Y G F + P +YP +PPS +L+ +PN+YE+G +CI+
Sbjct: 636 FRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 42.3 bits (95), Expect = 2e-04
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 145 KFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
K P+ PP +RF+T ++HPN+ +G +C+ L P
Sbjct: 34 KLEASTPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP 71
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 285 PCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDAS 392
P W P ++ +VL +++ L+ EPN P + S
Sbjct: 72 PKGMWKPALNISSVLSTILILMAEPNPDDPLMAEIS 107
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 46 VKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT 195
V +LG L E+ V FGP T Y+GG +K + P YP+ PSI T
Sbjct: 41 VTILG--GLNEFIVKFFGPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFT 88
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 187 FLTKVWHPNVYENGDLCISILHPPW 261
FLTK++HPNV +NG++C++ L W
Sbjct: 147 FLTKIFHPNVAKNGEICVNTLKKDW 171
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 297 WNPTQSVRTVLLSVISLLNEPNTFSPANVDA-SVMYRRWRDSKGKDKEYENIIRK 458
W P ++ VLL+V LL PN S N +A ++ R+ D + K + I K
Sbjct: 171 WKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHAK 225
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +1
Query: 19 REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPP 177
R + G +V+L+ E + + I GPP+T ++GG + + P YP++PP
Sbjct: 670 RLDQKSGIKVELVDE-TFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +1
Query: 55 LGEDNLFEWEVAI--FGPPDTLYQ------GGYFKAHMKFPPDYPYSPPSIRFLT-KVWH 207
L +DNLFEW V + LY+ + ++ FP ++P++PP +R L ++
Sbjct: 758 LVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNITFPENFPFAPPFMRVLAPRIEG 817
Query: 208 PNVYENGDLCISILHP 255
V + G +C+ +L P
Sbjct: 818 GFVLDGGAICMELLTP 833
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 34.7 bits (76), Expect = 0.045
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
+W+P +RTVLLS+ +LL+ PN P D + ++
Sbjct: 2 KWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 38
>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
Length = 446
Score = 34.7 bits (76), Expect = 0.045
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 279 ELPCERWNPTQSVRTVLLSVISLL 350
E ERW+P QSV +LLSVIS+L
Sbjct: 4 ESSAERWSPVQSVEKILLSVISML 27
>SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 33.5 bits (73), Expect = 0.10
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 115 YQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPPWMILS--LANCP 288
YQ + + ++ P P IRF+ V HP+ N LC I+ P W I+ L +C
Sbjct: 46 YQDWFHRMYLSSPESRSLIPDLIRFIVGVVHPS---NEVLCSDII-PRWAIIGWLLTSCQ 101
Query: 289 ANVGTLHNRFA 321
V + +++ A
Sbjct: 102 TAVASANSKLA 112
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -2
Query: 148 ISCVP*SIHLDKVYPAVRRLPLPTQIDCPLLAI*H 44
++C+P + L++ PAV RLP P ++ P+ A+ H
Sbjct: 471 VTCLPTHLPLERPVPAVTRLPTPLPLERPVPAVTH 505
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 148 ISCVP*SIHLDKVYPAVRRLPLPTQIDCPLLAI*H 44
++ +P + L++ PAV RLP P ++ P+ A+ H
Sbjct: 503 VTHLPTDLPLERPVPAVTRLPTPLLLERPVPAVTH 537
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 148 ISCVP*SIHLDKVYPAVRRLPLPTQIDCPLLAI 50
++C+P + L + PAV RLP ++ P+ A+
Sbjct: 311 VTCLPTHLPLQRPLPAVTRLPTHLPLEQPVPAV 343
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 91 IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLT 195
+ GP DT Y G F + FP YP PP ++ +T
Sbjct: 12 VTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 101 RRIHFIKVD-TSRHT*NSPLTTRIHHHPLG 187
R+IH I VD T RH SPL+ ++ HHP G
Sbjct: 39 RQIHAIAVDGTRRHANASPLSCQLLHHPTG 68
>SB_40772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 31.1 bits (67), Expect = 0.56
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 160 YPYSPPSIRFLTKVWHPNVYENG 228
+P S P ++F + V+HP ++ENG
Sbjct: 118 FPDSRPLVKFTSNVFHPQIHENG 140
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 290 RTLEPYTIGSHRTPLCNLTPQRAEHLQSGER 382
RT P I SH P C+L+P H+ S R
Sbjct: 441 RTTPPQLIPSHHPPYCSLSPLNNLHIYSATR 471
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +1
Query: 109 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGD 231
T+++ + + P+YP PP+++F++K+ V G+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/41 (24%), Positives = 23/41 (56%)
Frame = +1
Query: 109 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGD 231
T+++ + + P+YP PP+++F++K+ V G+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 199 VWHPNVYENGDLCISILHPPWMILSLANC 285
V PN NG C IL PP L+L +C
Sbjct: 142 VCRPNYKGNGIFCAGILSPPSQALTLYHC 170
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 94 FGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISILHPP 258
F PP YQ G FPP PP+++F +V+HP + + D C+ + P
Sbjct: 1049 FPPPPPPYQTG--SPIRAFPP-----PPAVKFGGQVYHPAMLHDYD-CVRVRRYP 1095
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 302 PYTIG--SHRTPLCNLTPQRAEHLQSGERRCKRDVPPLA 412
P +IG SHRT ++PQ + +++ E DVPPLA
Sbjct: 4324 PLSIGKTSHRTGASKISPQMTQQVEADE---IYDVPPLA 4359
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 67 NLFEWEVAIFGPPDTLYQG 123
N + + +IFGPP LYQG
Sbjct: 936 NHYPYSSSIFGPPQALYQG 954
>SB_53578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 369 SPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVARMEAEK 491
S A + + R+ S+ EN +RK+ +VAR+EA+K
Sbjct: 18 SEAVTPSGSLTSRYAASEESRAAKENFLRKEREVARIEAKK 58
>SB_39674| Best HMM Match : Recep_L_domain (HMM E-Value=7.1)
Length = 390
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVD 386
E+WNP++S T +L N T SP ++
Sbjct: 259 EKWNPSESQETSQQYYYALANSDLTLSPVGIN 290
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,904,435
Number of Sequences: 59808
Number of extensions: 413964
Number of successful extensions: 1078
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -