Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0062.Seq
(512 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 137 5e-33
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 113 5e-26
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 94 5e-20
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 88 3e-18
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 88 3e-18
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 84 5e-17
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 84 5e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 81 3e-16
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 73 2e-13
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 73 2e-13
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 69 1e-12
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 66 2e-11
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 65 2e-11
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 64 7e-11
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 63 1e-10
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 60 7e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 58 5e-09
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 56 1e-08
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 54 6e-08
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 54 8e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 53 1e-07
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 44 5e-05
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 40 0.001
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 38 0.003
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 36 0.013
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 29 2.0
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 3.4
Z46793-1|CAA86770.1| 367|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical ... 28 4.5
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 27 7.9
U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled re... 27 7.9
U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 27 7.9
EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein. 27 7.9
AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical... 27 7.9
AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor w... 27 7.9
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 137 bits (331), Expect = 5e-33
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 19 REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK 198
+ +PVEGF + + EDNLF W V I+GPP TLYQGGYFKA ++FP +YPYSPPS++F TK
Sbjct: 23 QSQPVEGFTIDV-NEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTK 81
Query: 199 VWHPNVYENGDLCISILHPP 258
VWHPNVYENGDLCISILH P
Sbjct: 82 VWHPNVYENGDLCISILHSP 101
Score = 130 bits (314), Expect = 6e-31
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +3
Query: 255 PVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDK 434
P+DDPQSGEL CERWNPTQSVRT+LLSVISLLNEPNT SPANVDASVMYR+W++ +D
Sbjct: 101 PIDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRKWKED--QDP 158
Query: 435 EYENIIRKQAQVARMEAEKEGIVVP 509
EY I+ KQ + ++ A+K+GI VP
Sbjct: 159 EYAKIVTKQVEESKKVAQKDGIQVP 183
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 113 bits (273), Expect = 5e-26
Identities = 41/80 (51%), Positives = 63/80 (78%)
Frame = +1
Query: 19 REEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK 198
R PV+GF L+ ++++++WEV + GPPDTLY+GG+FKA + FP DYP PP ++F+++
Sbjct: 16 RRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISE 75
Query: 199 VWHPNVYENGDLCISILHPP 258
+WHPN+ + G++CISILH P
Sbjct: 76 IWHPNIDKEGNVCISILHDP 95
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +3
Query: 255 PVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
P DD E P ERW P +V T+LLSVIS+L +PN SPANVDA+ M R
Sbjct: 95 PGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQR 144
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 94.3 bits (224), Expect = 5e-20
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = +1
Query: 28 PVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWH 207
P EG + EDN FEWE I GP +T + G F A + FP DYP SPP +RF ++H
Sbjct: 20 PPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFH 79
Query: 208 PNVYENGDLCISILHPP 258
PN+Y +G +CISILH P
Sbjct: 80 PNIYADGRVCISILHAP 96
Score = 66.9 bits (156), Expect = 8e-12
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 255 PVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGK-D 431
P DDP EL ERW+P QS+ +LLSV+S+L EPN SPANV A+ M WR+ + + +
Sbjct: 96 PGDDPTGYELSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKM---WREDRAQFE 152
Query: 432 KEYENIIRK 458
K ++++RK
Sbjct: 153 KIADSLVRK 161
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 88.2 bits (209), Expect = 3e-18
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
D+LF W+ I GPP++ YQGG F + FP DYP+ PP + F T+++HPN+ NG +C+
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILRSQW 93
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRD 416
+W+P ++ VLLS+ SLL +PN P + + +Y+ R+
Sbjct: 92 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE 132
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 88.2 bits (209), Expect = 3e-18
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCIS 243
D+LF W+ I GPP++ YQGG F + FP DYP+ PP + F T+++HPN+ NG +C+
Sbjct: 28 DDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLD 87
Query: 244 ILHPPW 261
IL W
Sbjct: 88 ILRSQW 93
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRD 416
+W+P ++ VLLS+ SLL +PN P + + +Y+ R+
Sbjct: 92 QWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRE 132
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 84.2 bits (199), Expect = 5e-17
Identities = 30/67 (44%), Positives = 47/67 (70%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
EDN+ WE IFGP +T ++ G FK ++F +YP PP+++F++K++HPNVY +G +C+
Sbjct: 30 EDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICL 89
Query: 241 SILHPPW 261
IL W
Sbjct: 90 DILQNRW 96
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVA 473
RW+PT V +L S+ SLL+EPN SPAN A+ +Y+ R +EYE +++ + +
Sbjct: 95 RWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENR------REYEKRVQQIVEQS 148
Query: 474 RME-AEKEGIVV 506
+ E EG V
Sbjct: 149 WLNFGENEGDAV 160
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 84.2 bits (199), Expect = 5e-17
Identities = 30/67 (44%), Positives = 47/67 (70%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
EDN+ WE IFGP +T ++ G FK ++F +YP PP+++F++K++HPNVY +G +C+
Sbjct: 30 EDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICL 89
Query: 241 SILHPPW 261
IL W
Sbjct: 90 DILQNRW 96
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 294 RWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVA 473
RW+PT V +L S+ SLL+EPN SPAN A+ +Y+ R +EYE +++ + +
Sbjct: 95 RWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENR------REYEKRVQQIVEQS 148
Query: 474 RME-AEKEGIVV 506
+ E EG V
Sbjct: 149 WLNFGENEGDAV 160
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 81.4 bits (192), Expect = 3e-16
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 LVPNSAREEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPS 180
+V NS E G +++L E NL E + I GPPDT Y GG F +K P YP+SPP+
Sbjct: 16 VVTNSEISET--GIMIEILNE-NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPN 72
Query: 181 IRFLTKVWHPNV-YENGDLCISILHPPW 261
++F TK+WHPNV + G +C+ IL W
Sbjct: 73 VKFSTKIWHPNVSSQTGVICLDILKDQW 100
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 72.5 bits (170), Expect = 2e-13
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +1
Query: 58 GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLC 237
G NLF WE AI G DT+++GG ++ M F D+P +PP +F ++HPNVY +G +C
Sbjct: 34 GTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVC 93
Query: 238 ISIL 249
+S+L
Sbjct: 94 LSLL 97
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 297 WNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQA 464
W P+ S++ +L+ + LLN PN PA +A +Y + R EYE ++K+A
Sbjct: 103 WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNR------AEYEKRVKKEA 152
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 72.5 bits (170), Expect = 2e-13
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +1
Query: 58 GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLC 237
G NLF WE AI G DT+++GG ++ M F D+P +PP +F ++HPNVY +G +C
Sbjct: 34 GTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVC 93
Query: 238 ISIL 249
+S+L
Sbjct: 94 LSLL 97
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 297 WNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQA 464
W P+ S++ +L+ + LLN PN PA +A +Y + R EYE ++K+A
Sbjct: 103 WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNR------AEYEKRVKKEA 152
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +1
Query: 25 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW 204
+PV G E N + V I GP D+ + GG FK + P +YP + P +RF+TK++
Sbjct: 19 DPVPGISANP-DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIY 77
Query: 205 HPNVYENGDLCISILHPPW 261
HPN+ + G +C+ IL W
Sbjct: 78 HPNIDKLGRICLDILKDKW 96
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYR 404
++W+P +RTVLLS+ +LL+ PN P D + ++
Sbjct: 94 DKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWK 131
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/63 (44%), Positives = 37/63 (58%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
E NL +W V + P Y G FK + FP DYP+ PP + F TK++HPNV E G C+
Sbjct: 29 ETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCL 87
Query: 241 SIL 249
I+
Sbjct: 88 PIV 90
Score = 37.5 bits (83), Expect = 0.006
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 252 PPVDDPQSGELP---CERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSK 422
P VD+ LP E W P V+++++SL+NEP P D + ++ +D K
Sbjct: 77 PNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQ--KDHK 134
Query: 423 GKDKEYENIIRKQAQ 467
K E RK A+
Sbjct: 135 KFMKTAEEHTRKHAE 149
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 65.3 bits (152), Expect = 2e-11
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = +1
Query: 70 LFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCISIL 249
L E E+ + P + +Y+GG F+ + PP+Y PP ++ LTKVWHPN+ E+G +C+SIL
Sbjct: 58 LHELELTVT-PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSIL 116
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 63.7 bits (148), Expect = 7e-11
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +1
Query: 19 REEPVEGFRVKLLGEDN-LFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFL- 192
+ E EG V N L +W++ + G TLY G F F P YP++ P + F+
Sbjct: 17 KSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVG 76
Query: 193 -TKVWHPNVYENGDLCISILHPPW 261
T HP++Y NG +C+SIL W
Sbjct: 77 ETIPAHPHIYSNGHICLSILSDDW 100
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 62.9 bits (146), Expect = 1e-10
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 76 EWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCISILH 252
E+ V GP DT Y+ G ++ + P YP+ PSI FL K++HPN+ E +G +C+ +++
Sbjct: 34 EFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
Query: 253 PPWMIL 270
W L
Sbjct: 94 QAWTAL 99
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 60.5 bits (140), Expect = 7e-10
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 22 EEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
++PV+G + L EDN+ EW + G PDT + GGY+ + F ++P+SPP+I +T
Sbjct: 33 QDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMITP- 90
Query: 202 WHPNVYENGDLCISI--LHP 255
+ N LC+SI HP
Sbjct: 91 -NGRFQTNTRLCLSISDYHP 109
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 57.6 bits (133), Expect = 5e-09
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +1
Query: 22 EEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
+EPV + L E N+ EW I G P T Y+GG + + FP D+P+ PP+I LT
Sbjct: 22 KEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP- 79
Query: 202 WHPNVYENGDLCISI--LHP 255
+ N LC+SI HP
Sbjct: 80 -NGRFQTNTRLCLSISDYHP 98
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLL--NEPNTFS--PANVDASVMYRRWRDSKGKDKEYENIIRK 458
+ WNP +V T++ ++S + N+P S + + ++ ++ + KDK + + +
Sbjct: 99 DTWNPAWTVSTIITGLMSFMNDNQPTLGSLVTSESERKLLAKKSKQWNLKDKSFCALFPE 158
Query: 459 QAQVARMEAEK 491
+A R E EK
Sbjct: 159 EADQIREEMEK 169
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = +1
Query: 82 EVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTK-----VWHPNVYENGDLCISI 246
+V I GP DT Y G F+ + FP YP+SPP FLT ++PN+Y +G +C+SI
Sbjct: 446 KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSI 505
Query: 247 L 249
L
Sbjct: 506 L 506
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 25 EPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVW 204
+P E + + + EDNLFEW I G T ++GG + + FP DYP PP++ LT
Sbjct: 24 QPTEMYHAQPM-EDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTPNG 82
Query: 205 HPNVYENGDLCISILHP-PWM 264
+ + L IS HP W+
Sbjct: 83 RFELNKKVCLSISGYHPETWL 103
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 53.6 bits (123), Expect = 8e-08
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI---------------RFLT 195
E+NL + + I GP T Y GG F+ + P YP+ PP + +F+T
Sbjct: 47 ENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVT 106
Query: 196 KVWHPNV-YENGDLCISILHPPW 261
++WHPN+ + G +C+ IL W
Sbjct: 107 RIWHPNISSQTGTICLDILKDKW 129
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 53.2 bits (122), Expect = 1e-07
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +1
Query: 91 IFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYE-NGDLCI 240
I G +T Y+GG F+ +K YP+ P+++F+TK+WHP+V +G +C+
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICL 435
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 44.4 bits (100), Expect = 5e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWH 207
ED + +A GP DT Y+ G F+ + FP +YP + P I+F T +W+
Sbjct: 27 EDKKITFHIA--GPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 70 LFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKV 201
L W +I GPP T Y+ + ++ +YP PP++RF TKV
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKV 81
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMY 401
E W P ++ VLL++I LLNEP+ P N+DA+ Y
Sbjct: 105 ENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDY 141
Score = 34.3 bits (75), Expect = 0.052
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 112 LYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNV 216
LY+ F + +YP+ PP ++F V+HPNV
Sbjct: 56 LYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNV 90
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 22 EEPVEGFRVKLL---GEDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFL 192
E +G+ K + G D W + GP + ++GG ++ + F +P PP F
Sbjct: 49 ERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFK 107
Query: 193 TKVWHPNVYENGDLCISIL 249
T + HPNV G + + +L
Sbjct: 108 TPLHHPNVDLRGSIYLKML 126
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 291 ERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDS-KGKDKEYENIIRKQAQ 467
E W+ S++ +L + +LL P+ AN++A + Y R++ + K + Y + A
Sbjct: 129 EHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAKARAYAWTVNPNA- 187
Query: 468 VARME-AEKEGI 500
V ME +E GI
Sbjct: 188 VGYMEVSENSGI 199
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 36.3 bits (80), Expect = 0.013
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 64 DNLFEWEVAIFGPPDTLYQGGYF 132
D+L+ W+ I GPP++ YQGG F
Sbjct: 28 DDLYHWQATIMGPPESPYQGGIF 50
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/86 (23%), Positives = 36/86 (41%)
Frame = +3
Query: 237 HIDSPPPVDDPQSGELPCERWNPTQSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRD 416
HI P +PQ G C R + E + + + + Y+R R
Sbjct: 52 HITDIPSSSEPQEGSRECRLSKEAHRKR------LRRARETSEETHTRLAKAADYKRKRC 105
Query: 417 SKGKDKEYENIIRKQAQVARMEAEKE 494
S+ ++EY +++QA+ +ME +E
Sbjct: 106 SEETEEEYRERLKRQAERKKMERMQE 131
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 3.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 124 GYFKAHMKFPPDYPYSPP 177
GY+ +PP YPY PP
Sbjct: 297 GYYPPGYPYPPGYPYPPP 314
>Z46793-1|CAA86770.1| 367|Caenorhabditis elegans Hypothetical
protein C56G7.2 protein.
Length = 367
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 43 RVKLLGEDNLFEWEVAIFGPPDTLYQ---GGYFKAHMKF 150
++KL+GE + EW +FG PD L G Y H KF
Sbjct: 61 KIKLIGESSQLEW---VFGIPDGLEYTDVGVYKIGHFKF 96
>AF003136-7|ABE73336.1| 1539|Caenorhabditis elegans Hypothetical
protein F28B3.1 protein.
Length = 1539
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +1
Query: 61 EDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSIRFLTKVWHPNVYENGDLCI 240
E+ F+W + DT++Q G + + P +P +++ +ENGD
Sbjct: 825 EEEAFDWITRVLRAIDTIHQVGIYCCALVPANHLPKTPLGGVHVSET--KQRFENGD--- 879
Query: 241 SILHPPWMILSLANCPANV 297
LHP +++ NC N+
Sbjct: 880 --LHPSTLLMCPHNCVLNL 896
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 73 FEWEVAIFGPPDTLYQGGYFKAHMKFPPDYPYSPPSI 183
F+ + +GPP T Y + PP +P+SPP+I
Sbjct: 37 FDVTLKTYGPPYTEYI-----VTVAIPPKFPFSPPAI 68
>U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled
related protein 1,isoform a protein.
Length = 539
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 336 VISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVAR 476
V S LN PN SP + + R + GK+ +++N AQ ++
Sbjct: 8 VDSSLNAPNVGSPTTMMERLRLRDQTEENGKEDDFDNKSVSSAQYSQ 54
>U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled
related protein 1,isoform c protein.
Length = 623
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 336 VISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRKQAQVAR 476
V S LN PN SP + + R + GK+ +++N AQ ++
Sbjct: 8 VDSSLNAPNVGSPTTMMERLRLRDQTEENGKEDDFDNKSVSSAQYSQ 54
>EF472000-1|ABQ96385.1| 1142|Caenorhabditis elegans SMG-3 protein.
Length = 1142
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 309 QSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRK--QAQVARME 482
Q V L V N+P+ N+D + RW++ K ++++ +++ Q R+E
Sbjct: 1047 QKQTRVTLMVRGKTNKPS-LKTVNIDDDQLQERWKEEKAREEQERADMKRLTLGQHRRIE 1105
Query: 483 AEKE 494
E+E
Sbjct: 1106 MEEE 1109
>AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical
protein Y53F4B.19 protein.
Length = 338
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 5/26 (19%)
Frame = +1
Query: 172 PPSIRFLTKVWHPNV-----YENGDL 234
PP F VWHPN+ YENG L
Sbjct: 165 PPKRLFTEFVWHPNIGMTQAYENGKL 190
>AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 3 protein.
Length = 1142
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 309 QSVRTVLLSVISLLNEPNTFSPANVDASVMYRRWRDSKGKDKEYENIIRK--QAQVARME 482
Q V L V N+P+ N+D + RW++ K ++++ +++ Q R+E
Sbjct: 1047 QKQTRVTLMVRGKTNKPS-LKTVNIDDDQLQERWKEEKAREEQERADMKRLTLGQHRRIE 1105
Query: 483 AEKE 494
E+E
Sbjct: 1106 MEEE 1109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,953,872
Number of Sequences: 27780
Number of extensions: 300877
Number of successful extensions: 926
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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