Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0059.Seq
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p pro...    35   0.13 
AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA...    35   0.13 
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    30   3.7  
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    30   3.7  

>AY119525-1|AAM50179.1| 2019|Drosophila melanogaster GH15728p
           protein.
          Length = 2019

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -1

Query: 526 FNPQKSKPKTGRQETITLAPGLTARLNAQPSRRGSTE 416
           F  QK+    GR+E ++LA  L++ L++  SRRG TE
Sbjct: 656 FGEQKTPRSNGRKEPLSLAQRLSSSLSSSASRRGDTE 692


>AE014296-292|AAF47517.1| 2019|Drosophila melanogaster CG13917-PA
           protein.
          Length = 2019

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -1

Query: 526 FNPQKSKPKTGRQETITLAPGLTARLNAQPSRRGSTE 416
           F  QK+    GR+E ++LA  L++ L++  SRRG TE
Sbjct: 656 FGEQKTPRSNGRKEPLSLAQRLSSSLSSSASRRGDTE 692


>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
            protein.
          Length = 1795

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 353  P*NMTICTGISRSVIPSCRWMRETTARNTGGSCTQDRETTDTKISMPRPQRQRAINFAR 177
            P N T  T ++    P C     T+ +NT  +CTQ+ +  +  + +  PQ+Q      R
Sbjct: 1075 PQNSTSSTDLTTVTRPPCPDPDSTSDKNTNTACTQELQQVNL-LELQSPQKQEQFTHTR 1132


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
            protein.
          Length = 1795

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 353  P*NMTICTGISRSVIPSCRWMRETTARNTGGSCTQDRETTDTKISMPRPQRQRAINFAR 177
            P N T  T ++    P C     T+ +NT  +CTQ+ +  +  + +  PQ+Q      R
Sbjct: 1075 PQNSTSSTDLTTVTRPPCPDPDSTSDKNTNTACTQELQQVNL-LELQSPQKQEQFTHTR 1132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,745,085
Number of Sequences: 53049
Number of extensions: 1119550
Number of successful extensions: 3066
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3062
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)