Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0050.Seq
         (836 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1...    32   2.2  
D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.               31   3.9  
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai...    31   3.9  
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai...    31   3.9  
BC018708-1|AAH18708.1|  434|Homo sapiens zinc finger CCCH-type c...    31   5.2  
AK027357-1|BAB55059.1|  434|Homo sapiens protein ( Homo sapiens ...    31   5.2  
L12141-1|AAA58477.1|  347|Homo sapiens fork head-related protein...    30   9.0  

>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
            protein.
          Length = 3530

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +2

Query: 275  PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 403
            PKP  L+P  L  +P +P++P+ +  L Q  + PET+  S  L
Sbjct: 2518 PKP--LAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558


>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
          Length = 1516

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +2

Query: 203  ILNVQEILKDMASQGDYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPET 382
            ++N Q++      QGD  ++ ++  +  E SP Y P     P     S  +TQ +S P +
Sbjct: 1266 LVNAQQVAGSAQQQGDQSIRTRQSSECSE-SPSYSPQPQPFPQNSSQSAAITQPSSQPGS 1324

Query: 383  SP 388
             P
Sbjct: 1325 QP 1326


>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
            containing 11 protein.
          Length = 1645

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +2

Query: 203  ILNVQEILKDMASQGDYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPET 382
            ++N Q++      QGD  ++ ++  +  E SP Y P     P     S  +TQ +S P +
Sbjct: 1395 LVNAQQVAGSAQQQGDQSIRTRQSSECSE-SPSYSPQPQPFPQNSSQSAAITQPSSQPGS 1453

Query: 383  SP 388
             P
Sbjct: 1454 QP 1455


>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
            containing 11 protein.
          Length = 1644

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +2

Query: 203  ILNVQEILKDMASQGDYEVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPET 382
            ++N Q++      QGD  ++ ++  +  E SP Y P     P     S  +TQ +S P +
Sbjct: 1394 LVNAQQVAGSAQQQGDQSIRTRQSSECSE-SPSYSPQPQPFPQNSSQSAAITQPSSQPGS 1452

Query: 383  SP 388
             P
Sbjct: 1453 QP 1454


>BC018708-1|AAH18708.1|  434|Homo sapiens zinc finger CCCH-type
           containing 10 protein.
          Length = 434

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = +2

Query: 275 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 409
           P P  ++P+ + V+PV PV     QPL  +T++ T +   T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429


>AK027357-1|BAB55059.1|  434|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14451 fis, clone HEMBB1001834. ).
          Length = 434

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = +2

Query: 275 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 409
           P P  ++P+ + V+PV PV     QPL  +T++ T +   T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429


>L12141-1|AAA58477.1|  347|Homo sapiens fork head-related protein
           protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 272 WPKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASG-PETSPASDNLSVP 412
           W   PE   +Y PV+PV  + PL S +TL   +S  P   PAS   S P
Sbjct: 15  WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGP 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,574,951
Number of Sequences: 237096
Number of extensions: 2546004
Number of successful extensions: 8649
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8643
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)