Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0045.Seq
         (511 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.91 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   0.91 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   2.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   4.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   6.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 371 NYVRNSNVDIYFK*KLVLSRFFLYFFYCLDVWTSSQPT 258
           N +   +   Y    L++   FL+F     V+TSSQ T
Sbjct: 254 NIIATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVT 291


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.8 bits (49), Expect = 0.91
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 371 NYVRNSNVDIYFK*KLVLSRFFLYFFYCLDVWTSSQPT 258
           N +   +   Y    L++   FL+F     V+TSSQ T
Sbjct: 250 NIIATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVT 287


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -3

Query: 368 YVRNSNVDIYFK*KLVLSRFFLYFFYCLDVWTSSQ 264
           YV   ++ ++    +VL   F Y   C+++W SS+
Sbjct: 203 YVTWYSISVFMVPLVVL--IFTYTSICIEIWQSSE 235


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 248 WLLEPIDIYNVKAPPTLRYK 189
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 194 YKF*GLNYSYNGC 156
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 71  PLVSPHG*VPPP 106
           P V PH  VPPP
Sbjct: 12  PTVLPHQEVPPP 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,579
Number of Sequences: 336
Number of extensions: 2502
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)