Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0045.Seq
         (511 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117325-1|AAI17326.1| 1221|Homo sapiens dermatan sulfate epimer...    31   2.3  
AK021539-1|BAB13840.1|  755|Homo sapiens protein ( Homo sapiens ...    31   2.3  
AF480435-1|AAN32895.1| 1222|Homo sapiens NCAG1 protein.                31   2.3  

>BC117325-1|AAI17326.1| 1221|Homo sapiens dermatan sulfate
           epimerase-like protein.
          Length = 1221

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -3

Query: 305 LYFFYCLDVW-TSSQPTCVKW 246
           L+F   LDVW T SQP C KW
Sbjct: 820 LWFIELLDVWSTCSQPICAKW 840


>AK021539-1|BAB13840.1|  755|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11477 fis, clone HEMBA1001746, weakly similar to
           Homo sapiens squamous cell carcinoma antigen recognized
           by T ).
          Length = 755

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -3

Query: 305 LYFFYCLDVW-TSSQPTCVKW 246
           L+F   LDVW T SQP C KW
Sbjct: 605 LWFIELLDVWSTCSQPICAKW 625


>AF480435-1|AAN32895.1| 1222|Homo sapiens NCAG1 protein.
          Length = 1222

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -3

Query: 305 LYFFYCLDVW-TSSQPTCVKW 246
           L+F   LDVW T SQP C KW
Sbjct: 821 LWFIELLDVWSTCSQPICAKW 841


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,200,350
Number of Sequences: 237096
Number of extensions: 1478304
Number of successful extensions: 2634
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2634
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)