Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0045.Seq
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-P...    28   6.4  
BT029593-1|ABL75652.1|  161|Drosophila melanogaster IP16955p pro...    28   8.4  

>AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-PA
           protein.
          Length = 266

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -3

Query: 254 VKWLLEPIDIYNVKAPPTLRYK 189
           + W+L  +D Y V++PP ++Y+
Sbjct: 239 IDWILMVVDNYTVRSPPKIQYR 260


>BT029593-1|ABL75652.1|  161|Drosophila melanogaster IP16955p
           protein.
          Length = 161

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 305 LYFFYCLDVWTSSQPTCVKWLLEPIDIY 222
           L+FF+C  +  ++ P C    L P+D++
Sbjct: 84  LFFFFCRGLQPAAVPKCSPHYLSPLDLF 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,372,559
Number of Sequences: 53049
Number of extensions: 424017
Number of successful extensions: 849
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)