Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0045.Seq
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.34 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   1.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   1.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   1.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   1.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   1.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   1.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   5.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.8  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           +IH WKY++YD
Sbjct: 34  VIHEWKYFDYD 44


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           +IH WKY +YD
Sbjct: 38  VIHKWKYLDYD 48


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           +IH WKY +YD
Sbjct: 37  VIHEWKYIDYD 47


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           +IH WKY +YD
Sbjct: 37  VIHEWKYLDYD 47


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           I+H WK+++YD
Sbjct: 33  ILHEWKFFDYD 43


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           I+H WK+++YD
Sbjct: 33  ILHEWKFFDYD 43


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           I+H WK+++YD
Sbjct: 33  ILHEWKFFDYD 43


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 479 IIHYWKYYNYD 447
           +I+ WKY +YD
Sbjct: 31  VIYEWKYIDYD 41


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 132 LLLHGRNRQGGGTYPCGLTR 73
           L L+G NR+  G Y C + R
Sbjct: 384 LRLNGINREDRGMYQCIVRR 403


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 132 LLLHGRNRQGGGTYPCGLTR 73
           L L+G NR+  G Y C + R
Sbjct: 384 LRLNGINREDRGMYQCIVRR 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,412
Number of Sequences: 438
Number of extensions: 3367
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)