Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0044.Seq
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015246-1|AAT94475.1| 1342|Drosophila melanogaster LP22668p pro...    29   5.4  
AF312580-1|AAG41426.1| 1342|Drosophila melanogaster roundabout 3...    29   5.4  
AE014134-236|AAF51387.2| 1342|Drosophila melanogaster CG5423-PA ...    29   5.4  
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         28   9.4  

>BT015246-1|AAT94475.1| 1342|Drosophila melanogaster LP22668p
           protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 176 VKXXRTSVHLVWDPPKGERYKNXXLLSRCIIV 271
           ++  RTSV L W PP+  R +N  L S  ++V
Sbjct: 750 IQFNRTSVFLKWLPPQPNRTRNGILTSYNVVV 781


>AF312580-1|AAG41426.1| 1342|Drosophila melanogaster roundabout 3
           protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 176 VKXXRTSVHLVWDPPKGERYKNXXLLSRCIIV 271
           ++  RTSV L W PP+  R +N  L S  ++V
Sbjct: 750 IQFNRTSVFLKWLPPQPNRTRNGILTSYNVVV 781


>AE014134-236|AAF51387.2| 1342|Drosophila melanogaster CG5423-PA
           protein.
          Length = 1342

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 176 VKXXRTSVHLVWDPPKGERYKNXXLLSRCIIV 271
           ++  RTSV L W PP+  R +N  L S  ++V
Sbjct: 750 IQFNRTSVFLKWLPPQPNRTRNGILTSYNVVV 781


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 168  DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVK 28
            DG  P D G+  +  + +  N +  Q +LGL   F R   DF  L K
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAK 969


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,553,537
Number of Sequences: 53049
Number of extensions: 479492
Number of successful extensions: 831
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)