Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0044.Seq
         (642 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g06900.1 68418.m00779 cytochrome P450 family protein                28   6.1  
At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transfera...    27   8.0  
At1g03080.1 68414.m00282 kinase interacting family protein simil...    27   8.0  

>At5g06900.1 68418.m00779 cytochrome P450 family protein 
          Length = 507

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +3

Query: 462 LIAVYDDKNAEMKIT 506
           L+ +Y+DKNAEMK+T
Sbjct: 276 LLDIYEDKNAEMKLT 290


>At5g12890.1 68418.m01479 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 488

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 100 VPVWNKSPLLKNVDSNVKGRKTVYAGK 180
           VPVW   P+LK+ D  V  R T  A K
Sbjct: 248 VPVWPVGPVLKSPDKKVGSRSTEEAVK 274


>At1g03080.1 68414.m00282 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) [Petunia
            integrifolia]
          Length = 1744

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +3

Query: 66   IKRIDRDRVECCSSLEQESTIKERGLQRQRAK 161
            ++ +  + VE C +LE  ST+K+R +++ + +
Sbjct: 1340 LEGLTNELVEACKNLESRSTLKDREIEQLKGR 1371


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,245,285
Number of Sequences: 28952
Number of extensions: 228490
Number of successful extensions: 432
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)