Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0037.Seq
         (455 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   0.95 
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    22   8.9  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    22   8.9  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.4 bits (53), Expect = 0.95
 Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
 Frame = -3

Query: 429 RLLPSLDVVAVSQAPSPESNPD--SPLPVTTMVVAETTIES**GXHLXDASPVLDHAICK 256
           RL   +++  +S  P P ++P   SP  +   + A    +S     + + S  L H  CK
Sbjct: 354 RLRWMMEMPGMSVPPQPHTHPSYGSPAEIPKHISALGAKQS--KMEVMELSD-LHHPNCK 410

Query: 255 IIQIHQNXRLRTRGPPSIGFDLIKALIPSLVRVLIACISSRITTVIQVTE*DLRNQN*YI 76
           +     N +L + G   IG D  +    S   +L++  +S+ T  ++     LRN++ YI
Sbjct: 411 M-----NRKLNS-GDLGIGADSCRRESESSDSILLSPEASKATEAVEFIAEHLRNEDLYI 464

Query: 75  E 73
           +
Sbjct: 465 Q 465


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 199 TNRRRASRPKSXILMNLDNFADRMV 273
           TNR   +RP++ IL +L+   D +V
Sbjct: 280 TNRGFPARPQNTILRDLNRIEDDVV 304


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -3

Query: 399 VSQAPSPESNPDSPLPVTTMVVAETTIES 313
           V  AP P  + D P  VT     E+ +ES
Sbjct: 298 VLPAPFPGPSTDEPRTVTRKRTTESDVES 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,388
Number of Sequences: 2352
Number of extensions: 9723
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)