Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0032.Seq
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   1.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   1.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   1.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   4.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   6.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   8.1  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 259 LLIYHNAYSYFHRLLIELF 203
           L++YHN+   FHRL    F
Sbjct: 213 LIVYHNSDDSFHRLTSNTF 231


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 259 LLIYHNAYSYFHRLLIELF 203
           L++YHN+   FHRL    F
Sbjct: 213 LIVYHNSDDSFHRLTSNTF 231


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 259 LLIYHNAYSYFHRLLIELF 203
           L++YHN+   FHRL    F
Sbjct: 213 LIVYHNSDDSFHRLTSNTF 231


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 259 LLIYHNAYSYFHRLLIELF 203
           L++Y NA   FHRL    F
Sbjct: 211 LIVYQNADDSFHRLTSNTF 229


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 259 LLIYHNAYSYFHRL 218
           L+IY NA   FHRL
Sbjct: 211 LIIYQNADDSFHRL 224


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 259 LLIYHNAYSYFHRLLIELF 203
           L+IY N+   FHRL  + F
Sbjct: 214 LIIYQNSDDSFHRLTSKTF 232


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 56  YCYRMTTNEP 85
           YCY +T N+P
Sbjct: 220 YCYNLTPNQP 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,502
Number of Sequences: 438
Number of extensions: 3765
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)