Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0022.Seq
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    26   1.6  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   2.9  
Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.           24   6.6  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           24   6.6  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   6.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   6.6  
AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    23   8.7  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 26  YNCVKICH-DFQFAILLLRNLIFYRINILI 112
           YNC    + D  FAIL+ R  ++Y  N+++
Sbjct: 194 YNCCPEPYIDITFAILIRRKTLYYFFNLIV 223


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -1

Query: 599 CSS--RSEPYLPSIGFHGTRTLRQKRKLFPDLWRR 501
           CSS  R  P++ S    GT TL Q  +L    WRR
Sbjct: 394 CSSHERLHPFMASQAASGTGTLTQFSELRVKAWRR 428


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 26  YNCVKICH-DFQFAILLLRNLIFYRINILI 112
           YNC    + D  FAI++ R  ++Y  N+++
Sbjct: 226 YNCCPEPYIDITFAIIIRRRTLYYFFNLIV 255


>Z22930-7|CAA80512.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -2

Query: 697 CGYGYEPARHLHVHPSPEFSSPQRVSGHRRKCGALRV 587
           C       RH  V PSP FS   R +  +R  G   +
Sbjct: 18  CAEAQANQRHRLVRPSPSFSPRPRYAVGQRIVGGFEI 54


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -2

Query: 697 CGYGYEPARHLHVHPSPEFSSPQRVSGHRRKCGALRV 587
           C       RH  V PSP FS   R +  +R  G   +
Sbjct: 18  CAEAQANQRHRLVRPSPSFSPRPRYAVGQRIVGGFEI 54


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 50  DFQFAILLLRNLIFYRINILI 112
           D  F I + R  +FY +NI+I
Sbjct: 232 DITFNITMRRKTLFYTVNIII 252


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 50  DFQFAILLLRNLIFYRINILI 112
           D  F I + R  +FY +NI+I
Sbjct: 232 DITFNITMRRKTLFYTVNIII 252


>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 774 VTDPICRLPLPTXILSTRGSSXWR 703
           V DP  RLP  T I+  +G   W+
Sbjct: 307 VKDPRHRLPTVTGIMIPKGVDWWK 330


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 858,342
Number of Sequences: 2352
Number of extensions: 17031
Number of successful extensions: 45
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)