Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0022.Seq
         (839 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB102719-1|BAD10847.1|  708|Homo sapiens lymphoid specific helic...    32   3.0  
U88966-1|AAC39933.1| 2548|Homo sapiens rapamycin associated prot...    30   9.1  
DQ310704-1|ABC33805.1| 1873|Homo sapiens akt substrate AS250 pro...    30   9.1  
AL161658-3|CAI40814.1| 1739|Homo sapiens RP11-470C13.2 protein.        30   9.1  
AL121896-1|CAI39939.1| 1739|Homo sapiens RP11-470C13.2 protein.        30   9.1  
AL078634-2|CAI95626.1| 1739|Homo sapiens RP11-470C13.2 protein.        30   9.1  
AB033098-1|BAA86586.1| 1023|Homo sapiens KIAA1272 protein protein.     30   9.1  

>AB102719-1|BAD10847.1|  708|Homo sapiens lymphoid specific helicase
           variant4 protein.
          Length = 708

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -1

Query: 614 PPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLWRRLQATLGYPV 474
           P  M    R  P +P++ +HGT+  RQK  L P L RRL++ +   V
Sbjct: 284 PNWMAEFKRFTPDIPTMLYHGTQEERQKLILTPFLLRRLKSDVALEV 330


>U88966-1|AAC39933.1| 2548|Homo sapiens rapamycin associated protein
            FRAP2 protein.
          Length = 2548

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 522  LPGPLAASSGHFGLPRRTLVFKDEGTIIETVPLPG 418
            LP P+  SS H G P   L  +  GT +  VP PG
Sbjct: 958  LPRPVTLSSSHHGCPGHHLHLQVPGTQMCAVPAPG 992


>DQ310704-1|ABC33805.1| 1873|Homo sapiens akt substrate AS250 protein.
          Length = 1873

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 248  NLNPPLCLPCRSRSTHSQVALVQCLLISARRDVALHAHHEKSAYLSLAKGNPVPIPEPG 424
            NLN P   PC       +  +   L  +A+ D  + +H+  SA    ++G P P+   G
Sbjct: 1541 NLNEPSLTPCGMNYDQEKEIIEVILRQNAQEDEYIQSHNFDSAMKVTSQGQPSPVEPRG 1599


>AL161658-3|CAI40814.1| 1739|Homo sapiens RP11-470C13.2 protein.
          Length = 1739

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 248  NLNPPLCLPCRSRSTHSQVALVQCLLISARRDVALHAHHEKSAYLSLAKGNPVPIPEPG 424
            NLN P   PC       +  +   L  +A+ D  + +H+  SA    ++G P P+   G
Sbjct: 1357 NLNEPSLTPCGMNYDQEKEIIEVILRQNAQEDEYIQSHNFDSAMKVTSQGQPSPVEPRG 1415


>AL121896-1|CAI39939.1| 1739|Homo sapiens RP11-470C13.2 protein.
          Length = 1739

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 248  NLNPPLCLPCRSRSTHSQVALVQCLLISARRDVALHAHHEKSAYLSLAKGNPVPIPEPG 424
            NLN P   PC       +  +   L  +A+ D  + +H+  SA    ++G P P+   G
Sbjct: 1357 NLNEPSLTPCGMNYDQEKEIIEVILRQNAQEDEYIQSHNFDSAMKVTSQGQPSPVEPRG 1415


>AL078634-2|CAI95626.1| 1739|Homo sapiens RP11-470C13.2 protein.
          Length = 1739

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 248  NLNPPLCLPCRSRSTHSQVALVQCLLISARRDVALHAHHEKSAYLSLAKGNPVPIPEPG 424
            NLN P   PC       +  +   L  +A+ D  + +H+  SA    ++G P P+   G
Sbjct: 1357 NLNEPSLTPCGMNYDQEKEIIEVILRQNAQEDEYIQSHNFDSAMKVTSQGQPSPVEPRG 1415


>AB033098-1|BAA86586.1| 1023|Homo sapiens KIAA1272 protein protein.
          Length = 1023

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 248 NLNPPLCLPCRSRSTHSQVALVQCLLISARRDVALHAHHEKSAYLSLAKGNPVPIPEPG 424
           NLN P   PC       +  +   L  +A+ D  + +H+  SA    ++G P P+   G
Sbjct: 729 NLNEPSLTPCGMNYDQEKEIIEVILRQNAQEDEYIQSHNFDSAMKVTSQGQPSPVEPRG 787


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,479,429
Number of Sequences: 237096
Number of extensions: 2660893
Number of successful extensions: 7087
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7085
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)