BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0022.Seq
(839 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 35 0.12
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 35 0.12
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 35 0.12
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 35 0.12
L11345-1|AAA28478.1| 733|Drosophila melanogaster DNA-binding pr... 31 1.5
BT023774-1|AAZ41782.1| 895|Drosophila melanogaster LD47422p pro... 31 1.5
AY089609-1|AAL90347.1| 754|Drosophila melanogaster RE22432p pro... 31 1.5
AY061581-1|AAL29129.1| 542|Drosophila melanogaster SD03057p pro... 31 1.5
AL050231-6|CAB43325.1| 755|Drosophila melanogaster EG:BACR37P7.... 31 1.5
AF135590-1|AAD34460.1| 733|Drosophila melanogaster erect wing 1... 31 1.5
AE014298-17|AAX52471.1| 581|Drosophila melanogaster CG3114-PD, ... 31 1.5
AE014298-16|AAX52470.1| 427|Drosophila melanogaster CG3114-PH, ... 31 1.5
AE014298-15|AAF45492.5| 840|Drosophila melanogaster CG3114-PB, ... 31 1.5
AE014298-14|AAX52469.1| 699|Drosophila melanogaster CG3114-PE, ... 31 1.5
AE014298-13|AAX52468.1| 545|Drosophila melanogaster CG3114-PG, ... 31 1.5
AE014298-12|AAX52467.1| 733|Drosophila melanogaster CG3114-PC, ... 31 1.5
AE014298-11|AAF45491.5| 733|Drosophila melanogaster CG3114-PA, ... 31 1.5
AE014298-10|AAX52466.1| 579|Drosophila melanogaster CG3114-PF, ... 31 1.5
AE013599-1810|AAF58306.1| 895|Drosophila melanogaster CG13350-P... 31 1.5
DQ138854-1|ABA86460.1| 878|Drosophila melanogaster CG13350 prot... 31 2.0
X58983-1|CAA41732.1| 671|Drosophila melanogaster orthodenticle ... 30 4.5
AE014298-1217|AAF46400.3| 671|Drosophila melanogaster CG12154-P... 30 4.5
AE014298-1216|AAX52481.1| 665|Drosophila melanogaster CG12154-P... 30 4.5
BT011185-1|AAR88546.1| 542|Drosophila melanogaster RE10280p pro... 29 6.0
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 365 EKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGPGRVF 529
E+ +Y A G P P PG + ++ + +K + R N DA GPGR F
Sbjct: 2830 ERESYYRQAHGGPAPEDTPGQLSAQSLIDAIIKHEINRSN-----DATAGPGREF 2879
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 365 EKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGPGRVF 529
E+ +Y A G P P PG + ++ + +K + R N DA GPGR F
Sbjct: 2965 ERESYYRQAHGGPAPEDTPGQLSAQSLIDAIIKHEINRSN-----DATAGPGREF 3014
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 365 EKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGPGRVF 529
E+ +Y A G P P PG + ++ + +K + R N DA GPGR F
Sbjct: 2965 ERESYYRQAHGGPAPEDTPGQLSAQSLIDAIIKHEINRSN-----DATAGPGREF 3014
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 35.1 bits (77), Expect = 0.12
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 365 EKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGPGRVF 529
E+ +Y A G P P PG + ++ + +K + R N DA GPGR F
Sbjct: 2965 ERESYYRQAHGGPAPEDTPGQLSAQSLIDAIIKHEINRSN-----DATAGPGREF 3014
>L11345-1|AAA28478.1| 733|Drosophila melanogaster DNA-binding
protein protein.
Length = 733
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>BT023774-1|AAZ41782.1| 895|Drosophila melanogaster LD47422p
protein.
Length = 895
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 609 ANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPLAASSGH 490
A L A T S F RI Q E T+PGP+ A +GH
Sbjct: 497 ATRFLVAVATSSSFLRIFTVMGTQREVLTIPGPMVAIAGH 536
>AY089609-1|AAL90347.1| 754|Drosophila melanogaster RE22432p
protein.
Length = 754
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 167 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 207
>AY061581-1|AAL29129.1| 542|Drosophila melanogaster SD03057p
protein.
Length = 542
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 609 ANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPLAASSGH 490
A L A T S F RI Q E T+PGP+ A +GH
Sbjct: 144 ATRFLVAVATSSSFLRIFTVMGTQREVLTIPGPMVAIAGH 183
>AL050231-6|CAB43325.1| 755|Drosophila melanogaster
EG:BACR37P7.7,FBgn0005427;ewg protein.
Length = 755
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 167 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 207
>AF135590-1|AAD34460.1| 733|Drosophila melanogaster erect wing
116kDa protein.
Length = 733
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-17|AAX52471.1| 581|Drosophila melanogaster CG3114-PD,
isoform D protein.
Length = 581
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-16|AAX52470.1| 427|Drosophila melanogaster CG3114-PH,
isoform H protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-15|AAF45492.5| 840|Drosophila melanogaster CG3114-PB,
isoform B protein.
Length = 840
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-14|AAX52469.1| 699|Drosophila melanogaster CG3114-PE,
isoform E protein.
Length = 699
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-13|AAX52468.1| 545|Drosophila melanogaster CG3114-PG,
isoform G protein.
Length = 545
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-12|AAX52467.1| 733|Drosophila melanogaster CG3114-PC,
isoform C protein.
Length = 733
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-11|AAF45491.5| 733|Drosophila melanogaster CG3114-PA,
isoform A protein.
Length = 733
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE014298-10|AAX52466.1| 579|Drosophila melanogaster CG3114-PF,
isoform F protein.
Length = 579
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 395 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAARGP 517
G P P+ + + +P LK S RG P W ++ R P
Sbjct: 253 GIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPP 293
>AE013599-1810|AAF58306.1| 895|Drosophila melanogaster CG13350-PA
protein.
Length = 895
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 609 ANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPLAASSGH 490
A L A T S F RI Q E T+PGP+ A +GH
Sbjct: 497 ATRFLVAVATSSSFLRIFTVMGTQREVLTIPGPMVAIAGH 536
>DQ138854-1|ABA86460.1| 878|Drosophila melanogaster CG13350
protein.
Length = 878
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 609 ANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPLAASSGH 490
A L A T S F RI Q E T+PGP+ A +GH
Sbjct: 490 ATRFLVAVATSSSFLRIFTVMGTQREVLTIPGPVVAIAGH 529
>X58983-1|CAA41732.1| 671|Drosophila melanogaster orthodenticle
protein.
Length = 671
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 323 LISARRDVALHAHHEKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPED 502
L A D+ HH S Y S A NP + +PG + SS+ T P P+
Sbjct: 395 LKDAGGDIGAGVHHHHSIYGSAAGSNP-RLLQPGGNITPMDSSSSITTPSPPITPMSPQS 453
Query: 503 AARGP 517
A + P
Sbjct: 454 APQRP 458
>AE014298-1217|AAF46400.3| 671|Drosophila melanogaster CG12154-PA,
isoform A protein.
Length = 671
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 323 LISARRDVALHAHHEKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPED 502
L A D+ HH S Y S A NP + +PG + SS+ T P P+
Sbjct: 395 LKDAGGDIGAGVHHHHSIYGSAAGSNP-RLLQPGGNITPMDSSSSITTPSPPITPMSPQS 453
Query: 503 AARGP 517
A + P
Sbjct: 454 APQRP 458
>AE014298-1216|AAX52481.1| 665|Drosophila melanogaster CG12154-PB,
isoform B protein.
Length = 665
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 323 LISARRDVALHAHHEKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPED 502
L A D+ HH S Y S A NP + +PG + SS+ T P P+
Sbjct: 389 LKDAGGDIGAGVHHHHSIYGSAAGSNP-RLLQPGGNITPMDSSSSITTPSPPITPMSPQS 447
Query: 503 AARGP 517
A + P
Sbjct: 448 APQRP 452
>BT011185-1|AAR88546.1| 542|Drosophila melanogaster RE10280p
protein.
Length = 542
Score = 29.5 bits (63), Expect = 6.0
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +2
Query: 323 LISARRDVALHAHHEKSAYLSLAKGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPED 502
L A D+ HH S Y S A NP + +PG + SS+ T P P+
Sbjct: 371 LKDAGGDIGAGVHHHHSIYGSAAGSNP-RLLQPGGNITPMDSSSSITTPSPPITPMSPQS 429
Query: 503 AA 508
AA
Sbjct: 430 AA 431
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,137,050
Number of Sequences: 53049
Number of extensions: 821562
Number of successful extensions: 2982
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2976
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -