Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0013.Seq
         (777 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical pr...    33   0.30 
Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical pr...    33   0.30 
Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z77655-6|CAB01139.1|  351|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U75587-1|AAB48299.1|  351|Caenorhabditis elegans caveolin-2 prot...    28   6.5  
U29380-4|AAA68738.1|  646|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical ...    28   8.6  
AL031634-2|CAA21035.1|  351|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical
           protein F40F9.6b protein.
          Length = 910

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 250 ESTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 393
           +ST+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 83  DSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 131


>Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical
           protein F40F9.6a protein.
          Length = 924

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +1

Query: 250 ESTLRVKVPEEITKSAASEYVPRSLLTDLPSELDMPL--DGEDEAEVVEG 393
           +ST+RV++ +E   +    YVP   L  LP EL+     +G+ EA+++ G
Sbjct: 97  DSTVRVQI-DEPESAIRKRYVPNPALVSLPEELEFSSVENGDQEAKIIGG 145


>Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical
           protein T22C1.8 protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 161 GTVEDDESADPRLAKDPAYEMFDKVDK 241
           G  +DD+ A  RLAK P+ E  D+ DK
Sbjct: 9   GNSQDDQQASRRLAKKPSDEKVDEKDK 35


>Z77655-6|CAB01139.1|  351|Caenorhabditis elegans Hypothetical
           protein C56A3.7 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 635 EEFHYPQHHVEHHVDHQAL 691
           E+ H+  HH EHH  HQ +
Sbjct: 36  EDHHHHHHHHEHHHQHQGI 54


>U75587-1|AAB48299.1|  351|Caenorhabditis elegans caveolin-2
           protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 635 EEFHYPQHHVEHHVDHQAL 691
           E+ H+  HH EHH  HQ +
Sbjct: 36  EDHHHHHHHHEHHHQHQGI 54


>U29380-4|AAA68738.1|  646|Caenorhabditis elegans Hypothetical
           protein ZK546.5 protein.
          Length = 646

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = +2

Query: 614 KPKVVNYEEFHYPQHHVEHHVDHQALPXDAQGPYQARF-YEDAHEIAYSAQF 766
           +P+ + +   H P  H E  V+    P D     QA    EDA+E A    F
Sbjct: 445 RPEFIEHRRLHIPTQHEEVVVESSEDPNDIPSTSQAMIPDEDANEAAEQHNF 496


>AL032655-4|CAB63413.2|  485|Caenorhabditis elegans Hypothetical
           protein Y6B3B.9 protein.
          Length = 485

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 453 DETVFALDPQWFRELDLLLPALNDFSLIF 367
           D  VF+ D +W++ LD LLP   +FS  F
Sbjct: 331 DADVFS-DEEWYKVLDHLLPVAKNFSTEF 358


>AL031634-2|CAA21035.1|  351|Caenorhabditis elegans Hypothetical
           protein Y32B12C.2 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -3

Query: 691 QGLVVYVVLHMVLRIVEFFVVHDLGLREFEDDHGTR*NKGNETKSKSLPGLQSDEGLAPK 512
           QG++  ++L +VL I    ++HD+ +R      G+  +    T       +     LAP+
Sbjct: 217 QGILFKLILSLVLPIATLILIHDIKMRNKVSSVGSSASNDRSTNLVVFMTISFIIALAPQ 276

Query: 511 G 509
           G
Sbjct: 277 G 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,199
Number of Sequences: 27780
Number of extensions: 308324
Number of successful extensions: 1076
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)