Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0011.Seq
(844 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 108 1e-22
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 107 5e-22
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 104 3e-21
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 102 1e-20
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 77 4e-13
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 69 2e-10
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 54 3e-06
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 46 0.001
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.045
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.10
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 37 0.73
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.3
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 1.7
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 34 3.9
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 34 5.1
UniRef50_Q3IPM1 Cluster: Probable mechanosensitive channel; n=1;... 33 6.8
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 33 9.0
UniRef50_A4YH22 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 108 bits (260), Expect = 1e-22
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = +3
Query: 267 SESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 425
SESYY LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 62 SESYYG-LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 107 bits (256), Expect = 5e-22
Identities = 50/53 (94%), Positives = 50/53 (94%)
Frame = +3
Query: 267 SESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 425
S S NSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 15 SSSPGNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 104 bits (249), Expect = 3e-21
Identities = 47/48 (97%), Positives = 48/48 (100%)
Frame = +3
Query: 282 NSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 425
+SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 6 DSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 102 bits (245), Expect = 1e-20
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +3
Query: 285 SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 425
+LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 25 ALAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 77.4 bits (182), Expect = 4e-13
Identities = 39/55 (70%), Positives = 44/55 (80%), Gaps = 2/55 (3%)
Frame = +1
Query: 286 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 444
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 285 SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 419
SL +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 14 SLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 57.6 bits (133), Expect = 4e-07
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +3
Query: 252 TNSPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 413
T + ++E LA +L R DW+NP +T +NRL +H P WR+++ AR PS
Sbjct: 6 TTTAFNELQTRPLATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +3
Query: 258 SPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 425
S S+ VL R DW N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 4 SDTGRSHTPDFHAVLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 285 SLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 419
SL ++ RRDWENP Q+N++ AH P ++ E+AR + SQ+
Sbjct: 3 SLQHIINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.045
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 375 WRNSEEARTDRPSQQLR 425
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.10
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -3
Query: 446 FAIRHSXAQLLGRAIGAGLFAITPAGERG 360
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 36.7 bits (81), Expect = 0.73
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 273 SYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEART 401
S+ S V + DWENP V Q+NRL A S+ E+A T
Sbjct: 20 SFTGSAKTVQVKNDWENPDVIQINRLPARATSYSFDTPEQALT 62
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 297 VLQRRDWENPGVTQLNRLAAHPP 365
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.5 bits (78), Expect = 1.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 309 RDWENPGVTQLNRLAAHPPFASWRNSEEA 395
R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 34.3 bits (75), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 297 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 404
+L +DW+NP + + + H P S+R +EAR D
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLD 42
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 33.9 bits (74), Expect = 5.1
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 285 SLAVVLQRRDWENP 326
SLAVVLQRRDWENP
Sbjct: 178 SLAVVLQRRDWENP 191
>UniRef50_Q3IPM1 Cluster: Probable mechanosensitive channel; n=1;
Natronomonas pharaonis DSM 2160|Rep: Probable
mechanosensitive channel - Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678)
Length = 426
Score = 33.5 bits (73), Expect = 6.8
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 571 SVVPSLEQESTFKERGLQRPXAKNRLSGRXATTGNHHPNXXFXGXRSRKALNXDP*XGPP 750
+V+ S++Q F++ G++ P + L+GR T G H N SRKA+ P G
Sbjct: 331 AVIESVKQ--AFEDEGIKIPFPQRELTGRAETGGFHITNTPTDNDDSRKAVRRRPGAGGD 388
Query: 751 I 753
I
Sbjct: 389 I 389
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 33.1 bits (72), Expect = 9.0
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 291 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQ 416
A L+RR+ +NPG QLN L A P F +++A +R S+
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSK 98
>UniRef50_A4YH22 Cluster: Putative uncharacterized protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Putative
uncharacterized protein - Metallosphaera sedula DSM 5348
Length = 163
Score = 33.1 bits (72), Expect = 9.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 232 NSRGGPVPIRPIVSRITIHWPSFYNVVTGK 321
N +GG VP+ P+ +R+ + WP FY V +
Sbjct: 23 NYKGGNVPV-PMTTRVNVDWPGFYEKVRSR 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,327,273
Number of Sequences: 1657284
Number of extensions: 15350751
Number of successful extensions: 28341
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 27630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28335
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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