Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0998
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O01418 Cluster: Gag protein; n=2; Obtectomera|Rep: Gag ... 63 5e-09
UniRef50_Q8MY38 Cluster: Gag-like protein; n=7; Papilio xuthus|R... 39 0.095
UniRef50_UPI0000E46710 Cluster: PREDICTED: similar to SJCHGC0468... 35 1.5
UniRef50_A4HEI5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_UPI00015B5708 Cluster: PREDICTED: similar to ENSANGP000... 35 2.0
UniRef50_UPI00005A3AA1 Cluster: PREDICTED: hypothetical protein ... 33 4.7
UniRef50_A1G943 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_UPI000023E0D9 Cluster: hypothetical protein FG01117.1; ... 33 6.2
UniRef50_Q0RSG7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_UPI0000E817B1 Cluster: PREDICTED: hypothetical protein;... 33 8.2
UniRef50_Q82K57 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q7WXA9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_Q9FNB7 Cluster: Gb|AAC98056.1; n=3; core eudicotyledons... 33 8.2
UniRef50_A6S3W6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
>UniRef50_O01418 Cluster: Gag protein; n=2; Obtectomera|Rep: Gag
protein - Bombyx mori (Silk moth)
Length = 712
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +1
Query: 142 TPSKRGRGRPATTRQYVGMAAARQAYLKAQXEEKELTEARAPHATRGERL 291
TPSKRGRGRP TT QYVG+AAA++AY+KAQ EE L E + R R+
Sbjct: 127 TPSKRGRGRPPTTGQYVGLAAAKEAYVKAQREELALREREVTESVRKLRV 176
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +2
Query: 380 EGPYVRALKELAVTVKEATEDLVGYTAAEEAKRLRAVNVKQEQRSCNCVRXSMKLEGSWR 559
+G YVRALKE+A ++EA ED+ T E KRL+ + +QE + +
Sbjct: 214 KGTYVRALKEMAAAIREAKEDMAARTTDGETKRLQELCRRQEAEILHLKNAIADMRSEMA 273
Query: 560 GLRRC*RCPHSTATPAP 610
L + P + P P
Sbjct: 274 RLAQAVGSPAAVPAPVP 290
>UniRef50_Q8MY38 Cluster: Gag-like protein; n=7; Papilio xuthus|Rep:
Gag-like protein - Papilio xuthus
Length = 698
Score = 39.1 bits (87), Expect = 0.095
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 145 PSKRGRGRPATTRQYVGMAAARQAYLKAQ-XEEKELTEARAPHATRGER 288
P KR RGRP TT YVG+A A+ A ++A+ EE+ EA A+R R
Sbjct: 97 PRKR-RGRPPTTGHYVGLAKAKLALIEAEREEERRRAEAEVVAASRVAR 144
Score = 33.5 bits (73), Expect = 4.7
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 380 EGPYVRALKELAVTVKEATEDLVGYTAAEEAKRLRAVNVK 499
+G YVRALK+ A + + T+ L T +EE K L+A N +
Sbjct: 190 KGGYVRALKDAAEEITKMTKALQRRTTSEETKGLQADNAR 229
>UniRef50_UPI0000E46710 Cluster: PREDICTED: similar to SJCHGC04689
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to SJCHGC04689 protein -
Strongylocentrotus purpuratus
Length = 1207
Score = 35.1 bits (77), Expect = 1.5
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Frame = +1
Query: 103 EAQDPTGVKPRAVTPSKRGRGRPATTRQYVGMAA--ARQAYLKAQXEEKELTEARAPHAT 276
E ++ G + TP KRGRGRP AA A++ K E+E T
Sbjct: 986 EGEEKVGDEVEVTTPQKRGRGRPKKVLNATEEAAKQAKEEAAKQAKAEREATPGTPRGRG 1045
Query: 277 RGERLXGLSLSPMPSVGSIKVQRWP*WSPPNPAA 378
R +++ SP S G ++ S P AA
Sbjct: 1046 RPKKVASPGASPRVSSGDKDSEKPQRDSSPRAAA 1079
>UniRef50_A4HEI5 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1243
Score = 35.1 bits (77), Expect = 1.5
Identities = 23/79 (29%), Positives = 39/79 (49%)
Frame = +2
Query: 407 ELAVTVKEATEDLVGYTAAEEAKRLRAVNVKQEQRSCNCVRXSMKLEGSWRGLRRC*RCP 586
E+A+T AT L +TAA + + AV+ + +R S + +G G
Sbjct: 518 EMAITQPLATSPLKAFTAAAQPQTPSAVSRAPTGATAKRLRNSSRADGPTEG-----SAH 572
Query: 587 HSTATPAPKHQGWKRRSLR 643
H+ ATP+ K QG ++R ++
Sbjct: 573 HTHATPSAKAQGLRQRRIK 591
>UniRef50_UPI00015B5708 Cluster: PREDICTED: similar to
ENSANGP00000005626; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000005626 - Nasonia
vitripennis
Length = 1896
Score = 34.7 bits (76), Expect = 2.0
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +2
Query: 332 SKCRGGPDGRRQIQQP-EGPYVRALK-ELAVTVKEATEDLVGYTAAEEAKRLRAVNVKQE 505
S C G RR ++P GPY + L+ E+A ++AT DLVG A + ++ R V+
Sbjct: 804 SDCEGQAGPRRYSKRPLRGPYGQMLEAEMAKQPRQAT-DLVGLVADDGLRQRRKVSANLS 862
Query: 506 QRSCNCVRXSMKLEGSWRGLRRC*RCPHSTATPAPKHQGWKRRSLRLTAHLLR 664
+ + S + G C H T + K +G S L A LLR
Sbjct: 863 FNASSSSGASAEAAGPPT------PCHHRTTSSPSKLEGLPGPSPELLAELLR 909
>UniRef50_UPI00005A3AA1 Cluster: PREDICTED: hypothetical protein
XP_533776; n=2; Canis lupus familiaris|Rep: PREDICTED:
hypothetical protein XP_533776 - Canis familiaris
Length = 797
Score = 33.5 bits (73), Expect = 4.7
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +2
Query: 332 SKCRGGPDGRRQIQQPEG-PYVRALKE-LAVTVK--EATEDLVGYTAAEEAKRLRAVNVK 499
S+ R P G+ Q PEG P++ LKE +++T + E+ +D G ++EE +R
Sbjct: 576 SRPRSAPHGKTQNMSPEGCPFILDLKEDISMTRRDTESEDDFYGGDSSEEERR------- 628
Query: 500 QEQRSCNCVRXSMKLEGSWR 559
+C++ S + E WR
Sbjct: 629 ---EGSSCIKGSSEKEYDWR 645
>UniRef50_A1G943 Cluster: Putative uncharacterized protein; n=1;
Salinispora arenicola CNS205|Rep: Putative
uncharacterized protein - Salinispora arenicola CNS205
Length = 85
Score = 33.5 bits (73), Expect = 4.7
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -3
Query: 99 AGAATQPVRAYIEHPFPPSSCRRRMGRRLGLV 4
A AAT+P R ++ HPF PSS RR+ G ++
Sbjct: 50 ARAATRPGRIFVGHPFLPSSERRQGGHPFAVI 81
>UniRef50_UPI000023E0D9 Cluster: hypothetical protein FG01117.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01117.1 - Gibberella zeae PH-1
Length = 379
Score = 33.1 bits (72), Expect = 6.2
Identities = 30/92 (32%), Positives = 40/92 (43%)
Frame = +1
Query: 106 AQDPTGVKPRAVTPSKRGRGRPATTRQYVGMAAARQAYLKAQXEEKELTEARAPHATRGE 285
A P+ PR P G +PAT + G+ + +Y Q K T P A+R
Sbjct: 272 ASRPSSSAPRRPAP---GPSKPATNVKRSGLLS--NSYKGPQP--KAATTPSQPRASRPV 324
Query: 286 RLXGLSLSPMPSVGSIKVQRWP*WSPPNPAAR 381
+ SLSP +V S + P SPP P AR
Sbjct: 325 KQEKRSLSPEQTVLSSSPEPGPSSSPPAPVAR 356
>UniRef50_Q0RSG7 Cluster: Putative uncharacterized protein; n=1;
Frankia alni ACN14a|Rep: Putative uncharacterized
protein - Frankia alni (strain ACN14a)
Length = 182
Score = 33.1 bits (72), Expect = 6.2
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 426 RRPRRTLWATPQPKRLRDCERSTSSRSRDPAT 521
RRPRRTL P P +LR R T RSR A+
Sbjct: 77 RRPRRTLAGWPGPGQLRPMNRMTGRRSRRRAS 108
>UniRef50_UPI0000E817B1 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 160
Score = 32.7 bits (71), Expect = 8.2
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -3
Query: 216 RLPGSGHANVLPCSRRASPSTL*RRDCSGLHTCRILS--LRAGAATQPVRAYIEHPFPPS 43
R PG+ H +RR SP+ R C+ + +R GAA P + P PP
Sbjct: 92 RNPGAAHPEARSSARRHSPAPA-RPHCAARRPPPLPPPFVRCGAALPPRPIGLRAPPPPI 150
Query: 42 SCRRR 28
CRRR
Sbjct: 151 GCRRR 155
>UniRef50_Q82K57 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 1199
Score = 32.7 bits (71), Expect = 8.2
Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Frame = +1
Query: 106 AQDPTGVKPRAVTPSKRGRGRPATTRQYVGMAAARQAYLKAQXEEKELTEARAPHA-TRG 282
A DP V P R PAT V AA + + +LTEA A A RG
Sbjct: 807 AADPAAVHPHLTRWFDDDRPLPATPDATVATAAQALLHTHRRRALDDLTEALADSAHRRG 866
Query: 283 ERLXGLSLSPMPSVGSIKVQRW 348
+ L + PS V RW
Sbjct: 867 DELLAVLAEEEPSAVCRAVDRW 888
>UniRef50_Q7WXA9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia eutropha H16|Rep: Putative uncharacterized
protein - Ralstonia eutropha (strain ATCC 17699 / H16 /
DSM 428 / Stanier 337)(Cupriavidus necator (strain ATCC
17699 / H16 / DSM 428 / Stanier337))
Length = 370
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3
Query: 33 ADTTTAEKGAQYKLGRAE*QLRLGGSGSDRCEAQSSHAVKAWTGTPCDYKAVRWHGR 203
A TT A + GR + R G G C A+ AW G P ++A R H R
Sbjct: 83 AGLTTEFASAHHPAGRVDSDARSAGGGLCHCRG----ALAAWQGVPASHRAQRRHPR 135
>UniRef50_Q9FNB7 Cluster: Gb|AAC98056.1; n=3; core
eudicotyledons|Rep: Gb|AAC98056.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 677
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 475 ETASGQRQAGAEILQLRKXLDEVRRELARVTQVLA 579
ET +++ GAEI QL K DE+ +L RV LA
Sbjct: 343 ETGEKEKELGAEIAQLEKQRDELEADLKRVNLSLA 377
>UniRef50_A6S3W6 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 765
Score = 32.7 bits (71), Expect = 8.2
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 136 AVTPSKRGRGRPATTRQYVGMAAA--RQAYLKAQXEEKELTEARA 264
AV P KRGRGRP ++Y+ A A RQA + K+ + A
Sbjct: 116 AVPPPKRGRGRPPKNKEYLEKAKALSRQAIQNESTKTKQNKDTEA 160
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,516,354
Number of Sequences: 1657284
Number of extensions: 13465956
Number of successful extensions: 43339
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 41186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43320
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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